Shewanella zhangzhouensis: K0H63_00105
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Entry
K0H63_00105 CDS
T09194
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh00071
Fatty acid degradation
szh00280
Valine, leucine and isoleucine degradation
szh00310
Lysine degradation
szh00362
Benzoate degradation
szh00380
Tryptophan metabolism
szh00410
beta-Alanine metabolism
szh00640
Propanoate metabolism
szh00650
Butanoate metabolism
szh00907
Pinene, camphor and geraniol degradation
szh00930
Caprolactam degradation
szh01100
Metabolic pathways
szh01110
Biosynthesis of secondary metabolites
szh01120
Microbial metabolism in diverse environments
szh01200
Carbon metabolism
szh01212
Fatty acid metabolism
Module
szh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0H63_00105 (fadB)
00650 Butanoate metabolism
K0H63_00105 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0H63_00105 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0H63_00105 (fadB)
00310 Lysine degradation
K0H63_00105 (fadB)
00380 Tryptophan metabolism
K0H63_00105 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0H63_00105 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0H63_00105 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0H63_00105 (fadB)
00930 Caprolactam degradation
K0H63_00105 (fadB)
Enzymes [BR:
szh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0H63_00105 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0H63_00105 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0H63_00105 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0H63_00105 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QYK05312
LinkDB
All DBs
Position
complement(24417..26567)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELTDDKIARLCFNAPGSVNKFDRETLASLNAALDVLKDSDAKAAVLTSGK
DTFIVGADITEFLALFAEEDAKLMEWIAQANVVFNKLEDLPFPTVSAIKGFALGGGCEAI
LATDFRVADTSAKIGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDQRPEDALKL
GAIDAVVAPENLEAAAIQMLNDALAGKLDWQARRARKQAPLTLPKLEAMMSFTTAKGMVY
AVAGKHYPAPMAAVSVVEQAAGMSRAEALVVEHNAFIKLAKTDVATALIGIFLNDQLVKG
KAKKASKLAKDIKHAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLLS
AQVARGRSTPDKMARVLNNITPALDYAPVKDVNVVVEAVVENPKVKAMVLADVENVVAED
AIIASNTSTISIDLLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVASVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGGDFAAIDKVMEKQFGWPMGPAYLL
DVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMYEAGRLGQKNGKGFYQYSIDKRGKPK
KDVDPASYTMLAEAFGAQKAFDAEEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVYG
LGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELASNNGSYYPKA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaatccaggtcgaactgaccgatgacaagattgcccggctg
tgtttcaacgctcccggctcggtaaacaagttcgatcgtgaaaccctcgcctccctcaat
gccgcactcgatgttctcaaagactctgatgccaaggccgctgtcctgacctcagggaaa
gacacctttatcgttggcgccgacatcaccgagtttttggccctcttcgccgaagaagac
gccaagctgatggagtggatagcccaggccaacgtagtattcaacaagctggaagacttg
cctttcccaaccgtgtcggccatcaagggcttcgccctgggcggcggctgtgaagcgatt
ctggccaccgatttccgtgttgccgataccagcgccaagataggtctgccagaaaccaaa
ctcggccttatccccggttttggcggtaccgtacgcctgccacgcctgattggtgccgat
aacgcactggagtggatcaccacaggtaaagatcagcgccccgaagatgcccttaaactg
ggtgcaatcgatgccgtagttgccccagaaaatctggaagcggctgccattcagatgctc
aacgacgccctcgccggcaagctcgactggcaggcccgccgcgcccgtaaacaggcgccg
ctgacactgcccaaactcgaagccatgatgtctttcaccaccgccaaaggcatggtgtat
gccgttgccggcaagcactaccctgcgcccatggccgccgtgtccgtggttgaacaagca
gccggtatgagccgcgccgaggccctggtcgtcgagcacaacgcctttatcaagctggca
aaaaccgatgttgccactgcgcttatcggtattttcctcaacgaccagttggtaaaaggc
aaggcgaaaaaagcctccaaactggcgaaggatatcaagcacgccgccgtattgggcgcc
ggaatcatgggtggtggtattgcctaccaaagcgccagcaaaggcacccctatcgtcatg
aaagacatcaatcaggccgcattggatttgggtctgaacgaagctgccaaactgctgagt
gctcaggttgcccgcggccgctcaaccccagacaagatggccagggtgctcaataacatc
accccggctctggactacgcccctgtcaaagacgtcaacgtcgttgtggaagccgtggtg
gaaaatcccaaggttaaggccatggtgctggccgatgtggaaaatgtagtggccgaggat
gccatcatcgcttccaacacctctaccatttccatcgatttactggccaagagcctcaaa
aaccctgcccgcttctgcggcatgcacttctttaacccggtacacaagatgccgctggtt
gaggtcattcgcggtaaagacaccagcgaagaaactgtcgcttccgtggtggcttatgcc
agcaagatgggcaaaacccccatcgtggtaaacgactgcccgggcttcttcgtaaaccgt
gtactcttcccttactttgccggcttcaatggcttgttggccgatggtggcgacttcgca
gccatcgacaaggtgatggaaaaacaatttggctggccaatgggtcctgcctacctgctg
gacgttgttggtctggacactggccatcatgctcaggccgtgatggcagaaggcttcccg
gaccgcatgggcaagtcaggtaaagatgccatcgatgtgatgtacgaagctggtcgcctc
ggtcagaagaacggtaaggggttctaccagtacagtatcgataaacgcggcaagccaaag
aaagacgtggatcctgcctcttacaccatgcttgccgaagcctttggtgctcaaaaagcc
ttcgacgccgaagaaattattgcccgcaccatgatccccatgatcatcgaaacggtacgc
tgcctcgaagaaggtattgttgccagcccggccgaagccgatatgggtctggtgtatggc
cttggcttccctccattccgcggtggtgtattccgctatctggataccatgggcgtggcc
aactttgtggcactggccgataaatatgcccacctgggcggcctgtatcaggttaccgac
gccatgcgcgaacttgccagtaacaatggcagctactatccaaaggcctga
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