Shewanella zhangzhouensis: K0H63_13535
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Entry
K0H63_13535 CDS
T09194
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh00730
Thiamine metabolism
szh01100
Metabolic pathways
szh01240
Biosynthesis of cofactors
szh04122
Sulfur relay system
Module
szh_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K0H63_13535 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
K0H63_13535 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szh03016
]
K0H63_13535 (thiI)
Enzymes [BR:
szh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
K0H63_13535 (thiI)
Transfer RNA biogenesis [BR:
szh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K0H63_13535 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
MTS_N
Motif
Other DBs
NCBI-ProteinID:
QYK04100
LinkDB
All DBs
Position
complement(3108021..3109475)
Genome browser
AA seq
484 aa
AA seq
DB search
MKFIVKLYPEIMIKSKPVRMRFTKMLESNIRNVLKKIDEDAKVQRQWDKIMVKVPKDKPE
LTALFAERLAHIPGIHHVLQVAEYDFETVDDIYQLALPVYRDMLKDKTFCVRVKRSGQHD
FNSIEVERYVGGGLNQFTEAKGVQLKNPDVTIQLEIDRDKLYMVSQRIEGLGGFPIAAQE
DVLSLISGGFDSGVASFQFIKKGSRTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVK
FVSVPFEEVVTEILERIENGQMGVVLKRMMMRAATRVADRMGIQALVTGESLGQVSSQTL
TNLNVIDRCTDLLILRPLISMDKPDIIREARRIGTEDFAASMPEYCGVISQRPTVKAVLS
KVEAEEQKFSEDLLDRVLAKAEVIDIRDIAVATSERVTETETVSSATGNEVIIDIRAPEE
EESRPLDVDGVEVKVIPFFRLATAFAELDKDKTYLLYCERGVMSKLQALYLQEQGYSNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgttaagctgtatcccgaaatcatgatcaagagcaaaccggtaagaatg
cgttttaccaagatgctcgagtccaacatccgcaacgtgctgaaaaaaatcgatgaggat
gccaaggtacagcgccaatgggacaagatcatggtcaaggtacccaaggacaagcctgaa
ctcacagcgctttttgccgagcgtctggcccatatcccgggtattcatcatgtactgcag
gtagccgagtacgactttgagaccgtggatgatatctatcagctcgcgctgccggtgtat
cgcgacatgctcaaagacaaaaccttttgtgtgcgggtaaagcgttcaggtcaacacgac
ttcaattccatcgaggttgagcgctatgttggcggtggtttgaaccagtttaccgaagcc
aagggcgtgcagctgaagaacccggatgtgaccattcagcttgaaatcgaccgcgacaag
ctttacatggtcagccagcgcatcgagggtttggggggcttccccattgccgctcaggaa
gacgtgctgtcattgatttccggcggctttgactcgggcgtggccagcttccagtttatt
aaaaagggttcccgtacccattattgcttcttcaaccttggtggtgcccagcacgaaatt
ggcgtgaaacaggtggcctaccacctgtggaagacctacggcgagtcgcacaaggtgaag
tttgtctctgtgcccttcgaagaagtggtaacagaaatcctcgagcgcattgaaaacggt
cagatgggtgtggttcttaagcgtatgatgatgcgcgccgccacccgtgtggccgatcgc
atgggcattcaggctctcgttaccggtgagagcctgggccaggtgtcgagtcagaccctg
accaacctgaatgtgattgaccgctgcaccgatctcttgatcctgcgtccactgatcagc
atggataaacctgacattattcgcgaagcccgtcgcatcggtactgaagattttgcggcg
tccatgcccgagtattgtggtgtgatatcccagcgccctacggtgaaagcggtactctcc
aaggtggaagccgaagagcagaagttctcggaagacttgctcgatcgcgtgctggcgaaa
gccgaagtcattgatatccgtgatattgccgttgcaaccagtgagcgagtgaccgaaacg
gaaaccgtctccagcgcgaccggaaatgaagttattatcgacatccgagcgccggaagaa
gaagagtccagacccctggatgtggacggcgttgaagtgaaggtgatccccttcttcagg
ctggccaccgcgtttgccgagctcgataaagacaaaacttacctgctttactgcgagcgt
ggcgtgatgagtaaactgcaagctctgtatttgcaagagcagggctacagcaacgtgaag
gtatatcgtccctga
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