Thermoplasma acidophilum: Ta0390
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Entry
Ta0390 CDS
T00037
Name
(GenBank) probable DNA-directed RNA polymerase chain B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tac
Thermoplasma acidophilum
Pathway
tac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ta0390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tac03021
]
Ta0390
Enzymes [BR:
tac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ta0390
Transcription machinery [BR:
tac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Ta0390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
KBP_C
Motif
Other DBs
NCBI-ProteinID:
CAC11534
UniProt:
Q03587
LinkDB
All DBs
Position
413957..417544
Genome browser
AA seq
1195 aa
AA seq
DB search
MKEIVDAYFKKYGIVNHQLDSMNSFYATPDNPNSVMQQIVDETKVSDDADPGYFVLDPAK
TGGHDIRIYYGRVRENGHYVGEQTIFIGKPEIKEASGASNQITPNEARLRDLNYLAPVTL
KLRIVEDGIEKGSEIIKVGDLPVMVRSKICTLSEENLDQYIEKNNGPIGLSRREKLQYVG
EDPDDPGGYFIIGGSERVIVSLEDLAPNKIMVEWEDRYESKVEVSKVFSQRGGFRALTSM
EKGTDGTINVSIPSVAGTVPLVILMKALGLERDVDVHDAIASVPEMEPIIYSNIEDSKNP
KVLPPNGVNTTEDAISYLEKRFAAGQAKEFRDKKISQMLDHSLLPHLGDSPSDRIRKAIY
LGRMARSLLELSLGIRKEDDKDHLANKRIKLAGDLMDELFRSAFQSVMKDLKYQLEKTYN
RKRGIKIRPAVRQDLLTQRVLHAMSTGNWIGGRTGVSQLLDRVSNLSTISHLRRIISPLT
RTQPHFEARDLHPTQWGRICPNETPEGQNCGLVKNAALLINVTQGIDPDSVMEILKGMDV
REVLEESPKKGRVYLNGDFIGYHDDPRYLVSRIREERRSGRMSDEVNVRYDDNTNEVIVN
SDRGRLRRPLLILKDGKTVLDRTMIERLKHGEISFEDLVKQGAIEWLDAEEEEDTYVAVY
AYDIPEKCPHCNSYLYRSMVDWVNPGESEITLECGFCHQRFNVPSKLSKENTHLEIDPAM
ILGVVASIIPYPEHNSSPRITIASAMAKQSLGFAQSNVRIRPDTRGHLLHYPQVPLVRTR
VMDYIHYDRRPAGQNFVVAVLSYEGYNIQDALVINKAAIERGLGRSTFFRTYSAEERRYP
GGQEDKFEIPTHDIIGARAEEYYKNLDDSGIIFPEAYVEGSDVLIGKTSPPRFLEEGEER
LGPQRRRESSVTMRPNESGYVDNVFLTVSESNSRVVKIKVRSERIPELGDKFASRHGQKG
VVGLVVPQEDMPFTEDGIIPDLIFNPHSIPSRMTVGHILEMIGGKIASRTGRFIDGTIFS
GEPEKSLRDALVKYGFRKSSTEVMYDGITGRRFKADIFVGVIYYQKLHHMVAGKFHARSR
GPVQILTRQPTEGRSRQGGLRFGEMERDTLIAHGAAMVIKDRLLDQSDGTVLYVCGNPSC
GHIAIYDRRKGTLRCPVCGNTGNIYPIETSYAFKLMRDELISLGVVMRLMLGDMK
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaaattgttgatgcgtattttaaaaaatatggaatagtaaaccatcagctggat
tctatgaattctttttatgcgacgcctgataatccaaacagcgtaatgcagcagatcgtg
gatgaaacgaaggtatctgacgatgccgatccaggatattttgttctggatcctgcgaaa
accggtggtcatgatataagaatatactacggccgtgtcagggaaaacggccattacgta
ggtgaacagaccatattcataggaaaaccggagataaaggaggcttccggtgcgtcgaat
cagatcactccaaacgaggcaaggctgagggatctgaactacctggcaccggttacgctc
aagctgagaattgttgaggatgggatagagaaagggtcagagataatcaaggtcggtgat
ctgcccgtcatggtcagatcaaagatatgcacactttccgaggaaaatcttgatcagtac
atagagaagaacaatggccccatcggattatcgaggagagagaagctgcagtacgtcggc
gaggacccggatgatccaggaggttacttcatcatagggggatcagagagggtcatagta
tcgctggaggatctcgcaccaaacaagatcatggtggagtgggaagaccggtacgaatca
aaggtcgaggtatccaaggtcttctcgcagcggggaggtttccgtgcgctcaccagcatg
gagaagggaacggacggaaccataaacgtatcaataccgagcgttgcgggcaccgttccg
ctggtaatactcatgaaggcgcttggccttgagagagatgtggacgtacacgatgcgata
gcctcggtaccggagatggaaccgataatatactcaaacattgaagattcaaagaatccg
aaggttctcccaccaaacggtgtcaacacaaccgaggatgcaatatcgtacctcgagaaa
aggtttgcagccggccaggccaaggagttcagggacaagaagatatcgcagatgctggat
cattctctgcttccgcatctcggcgattcgccttccgaccgcataaggaaggcgatatac
ttgggaaggatggccagatcgcttctggaactgagcctgggaataaggaaggaagacgat
aaggatcacctcgcaaacaagaggataaagcttgccggtgatctgatggacgagctcttt
agaagcgcgttccagagcgtgatgaaggatctcaagtaccagttggagaagacgtacaac
aggaagcgcggtataaagataaggccggccgtgaggcaggatctgctgacgcagagggtt
ctccatgccatgtccacgggcaactggataggcggcagaacgggcgtatcgcagctactg
gacagggtttccaacctcagcacgatcagccatctgaggaggataatttcgcctcttaca
aggacgcagccccacttcgaggcaagggaccttcatccgacccagtggggaaggatatgc
cccaacgaaactccagagggacagaactgcggtctggtcaagaacgccgccctcctcata
aacgtgacgcagggcatcgatcctgacagcgtcatggagatactgaaggggatggacgtc
cgcgaggtcctggaggagagcccgaagaaagggcgtgtttatctgaatggagatttcata
ggatatcacgatgatccgagataccttgtttcgaggatacgcgaggagcgcaggtcaggc
cgcatgtcggatgaggtaaacgtcaggtatgatgacaacacgaacgaggttatagtgaac
agcgaccgcggaaggctgcggaggccgctgctcatactcaaggacggaaagaccgtactg
gacaggacgatgatcgagaggctgaagcacggtgaaatatcgtttgaagatcttgtgaag
cagggtgcgattgaatggctcgatgcagaggaagaggaggatacatacgtggcagtttac
gcttacgacataccggagaaatgcccgcactgcaactcatacctctacagatccatggtg
gactgggtcaatccgggagaatccgagataaccctggaatgcggtttctgccaccagagg
ttcaacgtgccttcaaaactttcaaaggagaacacgcaccttgaaatcgatccagcgatg
atactcggtgttgtcgcctcaataatcccgtatccggagcacaactcgtctccgaggatt
acgatagcgtctgcaatggccaagcagtctcttggctttgcccagtcaaacgtgaggata
aggccggataccaggggccatctgctccattacccgcaggttccgctcgttcggacacgc
gtcatggattacatccactacgaccgcaggccggccgggcagaacttcgttgttgcggtt
ctttcatatgaaggatacaacatacaggatgcactggttataaataaggcagccatagaa
aggggccttggcaggagcactttcttcaggacgtactctgcagaggagaggagatacccc
ggaggccaggaggacaagtttgagattcctacgcacgatataataggggcaagggcagag
gagtactacaagaacctggatgacagcggtataatattccccgaggcctatgtcgaagga
tcagacgttctcatagggaagacatcacctccaagattcctggaggagggtgaagagcgc
cttggtccgcagaggaggcgcgaatcatccgttaccatgaggccaaacgaaagcggttac
gtcgacaacgtattcctcaccgtatcggagagcaacagccgcgtagtgaagataaaggtc
aggagcgagaggatacccgagctcggcgacaagtttgcgtcccggcacgggcagaagggg
gttgttggccttgtagttccgcaagaggatatgcccttcacggaggacgggataataccg
gatcttatattcaatccacattccattccgtccagaatgacggtcggccacatactggag
atgataggcggcaagatcgcatccaggacaggaaggttcatcgatggtactatattcagc
ggagagccggaaaagagcctgagagacgccctggtgaagtacggcttcagaaagtcctca
accgaggtcatgtatgatggtattactggcagaaggttcaaggccgatatctttgttggc
gtgatatactaccagaagctgcatcacatggtcgcaggtaaattccatgcaaggtccaga
gggccggtgcagatactgacgaggcagccaacagaaggaaggtcgaggcagggaggtctc
aggttcggtgagatggagagggataccctaatagcgcatggggcggcgatggtcataaag
gatcgtctgctagaccagagtgatggtacagtactgtacgtgtgcggaaacccctcatgc
ggtcacatcgcaatatacgaccgcaggaagggcacgctgagatgccctgtgtgcggaaat
acaggaaatatttatccgattgagacaagctatgccttcaagctgatgagggatgagctg
atctctctcggtgttgttatgaggttaatgctcggtgatatgaaatga
DBGET
integrated database retrieval system
