KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_19600
Entry
TRIADDRAFT_19600  CDS       T01069                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03020  RNA polymerase
tad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRIADDRAFT_19600
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRIADDRAFT_19600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tad03021]
    TRIADDRAFT_19600
   03400 DNA repair and recombination proteins [BR:tad03400]
    TRIADDRAFT_19600
Transcription machinery [BR:tad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TRIADDRAFT_19600
DNA repair and recombination proteins [BR:tad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRIADDRAFT_19600
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom DZR DUF5886 Nudix_N_2 zf_C2H2_10 DUF4892
Other DBs
NCBI-GeneID: 6749528
NCBI-ProteinID: XP_002108313
JGI: 19600
UniProt: B3RJJ7
LinkDB
AA seq 129 aa
MNDFAYGRTDSGPAFVGIQFCQECNNMLYPKEDKENKVLRYMCRNCEYSRIAENPCIYVN
KITHEINELTQIIADVVADPTLPRTREHACPKCMEREAVFFQAQSTLAEDNMKLYYVCSV
QGCGHRWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgaacgactttgcttatggtcgaactgactctgggcctgcctttgtcgggattcaattt
tgtcaggaatgcaataatatgttataccctaaggaagataaggagaataaagtcttgcga
tacatgtgtagaaattgtgaatatagccgaattgctgaaaatccctgcatatatgttaac
aaaataacacatgaaattaacgaattaactcaaattatagctgatgtagttgctgatcct
acgctgcctcgaacgcgtgagcatgcctgtcctaaatgcatggaacgagaagctgtcttc
tttcaagcacagtcgacgttagcagaggataatatgaagttatattatgtatgctctgtt
caaggatgtggtcatcggtggacagaatga

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