Trichoplax adhaerens (placozoan): TRIADDRAFT_33687
Help
Entry
TRIADDRAFT_33687 CDS
T01069
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tad
Trichoplax adhaerens (placozoan)
Pathway
tad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRIADDRAFT_33687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tad03400
]
TRIADDRAFT_33687
DNA repair and recombination proteins [BR:
tad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRIADDRAFT_33687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
MIF4G
AAA_29
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
6759344
NCBI-ProteinID:
XP_002118131
JGI:
33687
UniProt:
B3SD12
LinkDB
All DBs
AA seq
984 aa
AA seq
DB search
GNDNYIHQGLKWMQDGFRKDSKGRLQSDPEYDSRTLWLPSGFLKEQTPLMRQWWQIKSEN
FDSVLCFKVGKFYEMYHMDALIGISELGLILMRVTQSSTAVAHCGFPEIAFSRYAETLAQ
RGYRVVRVEQTETPQMMEERVKSSTRPTKFDKVVNREVCGRITKATRTFSVQNYEDPNSE
NAFLLAIIERERDDLAVGHSLLGVCFLDTTIGKFHLGQFTDDRQCSRLRTLVTHFQPVQI
LYERGKVSSKLQHIFQHDLLSAMKDALAPGSEFWDSNNTLKILSEKSYFTKDGNEADDAS
LDTWPETLRNFVEGDGFGITAKEDYDLTVSALGASIWYLTKCFLDYDLMSLKNFEEYVPP
DAPSPDRLVAGNILKHKHMILDAVTLINLDILPTASDSGLRGTLLEKLDYCVTPTGKRLF
KHWLCTPLCDPVLINDRLDSVEDLMAMSSAVSDCLNTLRKIPDLEKLINKIHSLGSSRRS
NHPDNKAIFFEDTAYSKRKILEFISVINGFKTLLQSIESLQTNRDKMKSRLLLQIITYTG
ENFSGIKGKFPQLLEYIQFFQKAFDHEQAKKDGKIIPKPGADPEYDDAIQSIAEIKQELE
HYLDSQKKRLNCRNIRYWGQGRNRYQIEVPESVLSRYTPNDYELRSRKKGFKRFWTGDIL
NLIESLTNAEERRDAALKDAMRRIFLKFDEYYENWNVAIQCVAVLDALCSLASYSSSIES
ESCRPKVAFAGNNDEPYVEIRNGRHPCISQTFSGGDFIPNDTIIGIKDSNNCNETGNSVL
VTGPNMGGKSTLMRQVGLLAIMAQLGCYVPATSCCLSPVDRLFTRLGASDRIMSGESTFF
VELSETTTILRHATKHSLVLLDELGRGTATYDGTAIAGAVVSHLAHEIKCRTLFSTHYHS
LVEDFVSDPNVRLGHMACMVENEDDDDPSKETITFLYKFVAGACPKSYGFNAARLAGLPD
NVIVKAKRKAKEFESSAKKLHLFR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
ggcaatgataactatattcaccaagggttaaagtggatgcaagatggatttcgaaaagat
tctaagggtcgccttcaatctgatccagaatacgatagtcgaactctttggttaccttct
ggcttcttaaaggaacaaactccgctaatgagacaatggtggcaaattaaatcagagaac
tttgattcagtattgtgctttaaagtggggaagttctatgaaatgtatcatatggatgct
ttaataggcatatctgagttgggattaatactaatgagagtaactcaaagttcaacggcc
gtagcgcattgtggattccctgaaatcgccttttcaagatatgcggaaactcttgctcaa
agaggctatagagttgttcgagtggagcaaaccgaaacaccacagatgatggaagaaaga
gttaaaagctctactcgcccaacaaagtttgataaggttgtcaaccgagaagtttgtggt
agaattacaaaagctacccgaacattcagtgttcaaaattatgaagatccaaattctgaa
aatgcatttcttttggctatcatagaaagagaaagagatgatcttgcagtcggtcacagc
ttactcggtgtttgcttccttgacacaactattggaaaatttcaccttggtcagtttact
gatgatcgacagtgttctcgattacggaccttagtaacgcactttcaaccggttcagata
ttgtatgaacgtggaaaagtctctagtaaattacagcatatattccagcacgatttgcta
tccgcaatgaaggatgcccttgctcctggatccgaattttgggatagtaacaacacttta
aaaattttatcagaaaagagctattttactaaagatggaaacgaggctgatgatgcttcg
ttggatacctggccagaaaccttacgaaattttgttgaaggagacggatttggtattact
gctaaggaagattacgatctcactgtcagtgctttgggtgcctccatctggtatcttacg
aaatgcttcttggattatgatttgatgtctttgaaaaattttgaggagtacgtcccgcct
gatgctccatcgccagatcgtcttgtagctggaaatattctaaagcataaacatatgatt
ctagatgcagttactctcataaatttagatattttaccgacagcgagtgactctggtctt
cgtggtactttgctggaaaagcttgattattgcgttacacctacgggcaaacgattattc
aagcactggctttgtacaccgttgtgcgatccggttttaatcaatgacaggcttgattct
gtagaagacttgatggctatgtcttcggcagtatctgactgtttaaataccctgcgaaaa
atccctgatctcgaaaaattaattaacaaaatacatagccttggttcctcccgaagaagt
aatcaccctgataacaaagctatcttttttgaagataccgcgtatagtaaaagaaaaatt
ttggaattcatatctgtaattaatggttttaaaaccctattacaaagcattgaatcttta
caaaccaaccgagataagatgaaatctaggctgctattgcaaattatcacttataccggc
gagaattttagcggcattaagggaaagtttcctcaattgttggagtatatacaattcttt
cagaaagcatttgatcatgagcaagcaaaaaaggatggtaaaataatacctaaaccgggt
gctgatcctgagtacgatgatgccattcagtccatagcagaaattaagcaagaacttgaa
cattaccttgattcacaaaaaaagagattaaattgtcgtaacattcgatactggggacaa
gggcgcaaccgatatcagatagaggtgcctgaatcagtgctatcacgatatacaccaaac
gactatgaattgagatctcgcaaaaagggtttcaagcgattttggaccggcgatatattg
aatttaatagaaagcctaacgaacgctgaagaaaggcgagacgcagctttgaaagatgcg
atgcgaaggatttttctgaagtttgacgagtactatgaaaattggaacgtggcgatacaa
tgcgtagccgtgttggatgcgttatgtagtctggcatcttacagttctagcattgaaagc
gagagttgccgaccaaaagttgcattcgccggcaataacgatgagccatacgtagaaatt
cgaaatggtaggcatccttgcatctcgcaaactttcagtggtggtgattttatccccaac
gatactatcattggaattaaggattcgaataattgcaacgaaactggtaatagtgtcctg
gtaaccggaccaaacatgggtggtaaatcaacgttgatgaggcaggtgggcctgctggca
attatggcacagcttggttgctatgtcccagccacttcctgctgtctatctccagttgat
cgattatttacaagactaggagcatcagataggatcatgtcaggagagagtacatttttt
gtcgagctaagcgaaactacaacaattttacgacatgcaacgaagcactctcttgttctc
ctagatgagctaggacgtggaaccgcaacttacgatggcactgctattgccggtgcggtc
gttagtcatcttgcgcatgaaattaagtgtcgcacgctattttcaacgcattatcactcg
ttagtagaagattttgtatccgatcccaacgttcgccttggtcacatggcgtgtatggtg
gaaaacgaagatgatgatgatcctagtaaggagactattaccttcctatataaatttgtt
gctggagcctgccctaaaagttatggatttaatgctgctcgcttagcaggcttgcctgac
aacgtaatagttaaggcaaaaagaaaagcaaaagaattcgagagtagtgctaagaaattg
catttgttcaggtaa
DBGET
integrated database retrieval system
