Trichoplax adhaerens (placozoan): TRIADDRAFT_49721 Help Entry TRIADDRAFT_49721  CDS       T01069                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism tad  Trichoplax adhaerens (placozoan) Pathway tad03020   RNA polymerase tad03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tad00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     TRIADDRAFT_49721   09124 Replication and repair    03420 Nucleotide excision repair     TRIADDRAFT_49721  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:tad03021]     TRIADDRAFT_49721    03400 DNA repair and recombination proteins [BR:tad03400]     TRIADDRAFT_49721 Enzymes [BR:tad01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      TRIADDRAFT_49721 Transcription machinery [BR:tad03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      TRIADDRAFT_49721 DNA repair and recombination proteins [BR:tad03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       TRIADDRAFT_49721 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R Motif Other DBs NCBI-GeneID:  6750042 NCBI-ProteinID:  XP_002108090 JGI:  49721 UniProt:  B3RM26 LinkDB All DBs AA seq 1784 aa AA seqDB search MAQQQQIISTAPIRNINRVQFGILSPDEIKRMSVTPGGIRYAETYEAGKPKLCGLLDPRQ GPVDRSSRCQTCAGTVNECPGHFGHIELARPVFHIGFLVKSIKILRCVCFYCSKLLIKKS DPKVIDIISKTRGRLRVRLQHIYDLCKSKNICQNDDGEDAEGLDEKKEHSGCGRHQPIIR RNGLELTAEWKKINEDSQERKINLTAERVYEIFKRISDEDSEVLGMDPRFARPDWMIITC LPVPPLHVRPSVVMHGSARSQDDLTHKLADIIKANNNLQRNESCGAPAHVITEDTRMLQF HVTTLTDNEVPGMPKAMQKSGRPLKSIKQRLKGKEGRIRGNLMGKRVDFSARTVITPDSN LEIDQVGVPRSIAQTLSYPEIVTPLNIDRMYVLVRRGPDHYPGAKYVIRESGERINLKFR ASRDDLTLHFGDKVERHIQNDDIIVFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPY NADFDGDEMNLHVPQSLESRAEITEICMVPRQIVTPQSNKPVMGIVQDSLTAVRKFTMRD VFLEKEVVMNLLMWLPNWNGKMPQPAILRPKELWTGKQIFSLIIPGNVNLIRTHSTHPDD EDKGPYKFISPGDTKVLIEHGEVISGILCKRTLGTSSGSLVHVIFNELGHEVARQFYGNI QTVVNNWLLIEGHSIGIGDSIADEATYQDIQSTILKAKQDVVEVIEKAHNDELEPTPGNT LRKTFENQVNRILNDARDKTGSSAQKSLSNFNNFKAMVVAGSKGSKINISQVIAVVGQQN VEGKRIPFGFRHRTLPHFIQDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAV KTAETGYIQRRLIKAMEGVMVHYDGTVRNANMQLIQLCYGEDGLDGSAIEFQDMPSLKLS HTGFQRRFRFDIQNEKRLKQYLHGNIVRSIITDAEVKEKLQSEFEQLSKDRNAVRSILQN GDSRVALPVNLNRLIWNAQKIFHVDPRKSSDLHPMKVIDDVCELSRKLVIVHGEDRISKQ AQENATLLFNILLRSVLSSKRVTEEYHLTSEAFDWLIGEVQPGEMVGPLAAQSLGEPATQ MTLNTFHYAGVSAKNVTLGVPRLKEIINVSKKPKTPSLTVILTGPAARDAEKAKDVLCRL EHTTLRKVTANTAIYYDPNPKNTVISEDQEFVNAYYEMPDFEPSQLSPWLLRIELDRKRM TDKKLTMEQIAEKINAGFGEDLNCIFNDDNAEKLILRIRIVNNDNKEGVDRDEQWDRMDD DVFLRCIESNMLSDMTLQGIEQISKVYMHLPLQDSKKRMIINEEGEYKAIQEWILETDGV NLQKVLSVKDVDAVKSTSNDIVEIFSVLGIEAVRKAVEKEMNHVISFDGSYVNYRHLALL CDVMTCRGHLMAITRHGINRQEVGALMRCSFEETVDILMDAAFHSETDYLRGVSENIMLG QLSKIGTGCFDLLLDPEKCKDGMEIPANVPVAGMINGVGAGVFYGDGAGMSPQMTPWDSS LTTPSYEGPYTPGMGGGMTPGAAGFSPSGASEPSFSPASYSPNWSPGPAASPGSPGPSSP YMQSPTDITFYVAFQSIILTVESKLLTDFSKYSPTSPSYSPTSPRYSPTSPSYSPTSPRY SPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTS PRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYS PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPDYSPN NT seq 5355 nt NT seq  +upstreamnt  +downstreamnt atggcgcagcaacagcaaattatttcaacagctccaataaggaatatcaaccgagttcag tttggaattcttagtccggatgaaattaaacgaatgtctgtgacaccaggcggaattcga tacgctgaaacatatgaagcaggcaaaccgaaattatgtggtttattagatccaagacaa ggaccagttgatcgtagctcaagatgccagacttgcgcgggtaccgttaatgagtgccct ggtcacttcgggcatattgaactagccaggcccgtatttcatattggtttcttggtcaaa tcaatcaagatacttcgttgtgtatgcttttactgctctaagctactcataaaaaagtct gatccaaaggtcatcgatataatatctaagacacggggcagactaagagtaagattgcaa catatatatgatctatgtaaaagcaagaatatctgccaaaatgatgatggcgaagatgca gaaggcttagatgagaaaaaggaacatagtggatgtggacgccatcaacctatcattagg cgcaatggattagaattaactgctgaatggaaaaaaataaatgaagattctcaagagaga aaaatcaatctaacagctgaacgtgtctatgaaatattcaaacgtatatctgatgaagat tctgaagtacttggaatggatccacgatttgctcgacccgattggatgattatcacatgt ttgccagttcctcctctacatgttagaccatctgtagtgatgcatggctctgcaagaagc caggatgatttaacgcataaactggcagatataatcaaggcgaataacaacctgcaacgg aacgaaagctgtggcgctccggctcatgttattacggaagatactagaatgctgcaattc catgttactacgttaactgacaatgaagtccctggaatgcctaaggcaatgcaaaaatct gggagaccgttgaaatcaattaagcaaaggttaaaaggtaaagagggtcgtattcgtggt aatttgatgggaaaacgtgtagatttttctgcccgtactgtcatcacgccggattcaaat cttgagattgatcaagttggggttcctcgatctattgctcaaacactctcatatcctgag atagtaactcctctaaacattgataggatgtatgtattagtaagacgaggaccggatcac tatcccggcgccaaatatgttattcgagagtcgggagaacggataaatttaaaatttcgt gcttcccgcgatgacttaacgttacactttggcgataaggtcgaaaggcatattcaaaac gacgatattatcgtatttaatcgtcaacctacactacataagatgtctatgatgggtcat cgagtgagaatattgccatggtcaacatttagattgaatcttagtgttaccacaccttat aatgctgatttcgatggagatgaaatgaatttgcatgtaccccagtcgttggaatctcga gcggaaataacagagatttgcatggtacctcggcaaatagtgacgccacaatcaaataaa cccgttatgggtattgtgcaagattcgctaacggcagtacgcaagtttaccatgcgagat gtcttcttagaaaaagaagtggtgatgaatttattgatgtggctcccgaattggaatggg aagatgccacaacctgctattcttagaccgaaagagttatggacaggcaaacagatattc agcttaattataccaggaaatgttaacttaatcagaacacattccactcatccagatgac gaagacaaaggtccatataaatttatttctccgggtgatactaaggttctaattgaacac ggggaagttatttctggtattttatgcaaaaggacacttggtacatcctctgggagttta gtccatgtcatttttaatgaattgggacatgaagttgcccgacagttttatggcaatatt cagaccgtagtcaataactggttattgattgaaggtcacagtattggtataggagactca attgcagatgaagctacttatcaggatattcaaagcactatacttaaagccaaacaagat gtagttgaagttatagaaaaagcccataacgatgagcttgaacctacacctgggaatact ttaagaaaaacttttgaaaatcaggtaaatcgtattcttaacgatgctcgagataaaact ggaagtagtgcccagaaaagtttatccaattttaataattttaaagctatggttgttgcc ggatctaaaggatccaagattaacatttctcaggttattgctgtagtcggacaacagaat gtggaaggcaagcgaattccgttcgggttccgccatagaactttgccccattttattcag gacgattatggtccagaaagtcgcggattcgtggaaaattcatatttagctggtttaaca ccaactgaatttttctttcatgcaatgggtggtcgtgaaggtttgattgatacagcagtt aaaactgctgaaactggttacatccaaagacgcttgattaaagctatggaaggagtgatg gtgcattacgatggaactgtacgtaatgctaacatgcaattgatccagctatgttatgga gaagatggattggacggaagtgcaattgaatttcaagatatgccgagtttgaagctatcg cacactggttttcagagacgtttccgttttgatattcaaaacgaaaagcgccttaagcaa tacttacatggtaatattgtaagatcaataatcacggatgccgaagttaaagaaaaatta caatctgaatttgagcaactaagcaaagacagaaatgcagttcgaagcattctccaaaat ggcgatagcagagttgctctgccagtaaatttaaaccgtctaatttggaatgcacagaag attttccacgtcgatcctcgtaaatcgagtgatctccatccaatgaaagttattgatgat gtttgtgaattgtcaaggaaattagtaatagtccacggggaggacaggataagtaaacaa gctcaagaaaatgctacgttactgtttaatattttgctacgatctgtattgtcctcaaaa cgtgtaacagaagagtatcatttgacctctgaagcgtttgattggctaataggggaagta caacctggtgaaatggttggccctctagcagctcaatcccttggtgaaccggcaacgcaa atgacactaaatacatttcattatgctggggtatcggctaaaaatgtaacactcggtgtt cctagactaaaggagataataaatgtttccaagaaaccgaaaactccatctttgactgtc atacttacaggacctgctgctagggatgctgagaaagcaaaggatgttctttgtcgttta gagcatacgacattacgtaaagttacagcaaatactgcaatctattatgatccaaatccc aaaaataccgttatcagtgaagatcaagagtttgtcaacgcttactatgaaatgcctgat tttgagccatcgcagttatcgccgtggttgctacgtatagaattagatcgaaagagaatg actgacaaaaaactaactatggaacaaatagcggaaaaaatcaatgccggatttggagag gatttaaactgtatctttaacgatgataatgccgaaaagcttattttacgaataaggatt gtcaacaatgacaataaagagggtgttgatagagatgaacaatgggatagaatggatgat gatgtatttttacgatgtatagaatctaatatgttgagcgacatgactttacagggaata gagcaaatatctaaggtatacatgcatctaccccttcaagacagtaaaaaacgaatgata atcaacgaggaaggagagtacaaagctattcaggagtggattttagaaactgatggtgtt aatttgcaaaaggtattaagtgtgaaagacgttgatgctgtcaaaagtacttctaatgat attgtcgagattttttctgttcttggaattgaagcagttcgtaaggcggttgaaaaagaa atgaatcacgttatttcctttgatggatcttacgtcaattatcgtcatttagctctgttg tgtgatgtcatgacatgtagaggccatttgatggctattacaagacacggtataaatcgt caagaagttggtgctcttatgaggtgtagtttcgaagaaactgtagatatattgatggat gcagcattccattctgagacagattatttgcgtggtgtgagtgaaaatataatgttaggt caactatccaaaattggtactggatgttttgatttgctgttagatccagaaaaatgtaaa gatggtatggaaataccagccaatgttccagttgccggtatgattaatggggttggtgct ggagttttttatggtgatggcgctggaatgtcgccgcaaatgacgccttgggattctagt ctgaccactccaagttacgaaggtccgtatactcctggtatgggaggcggtatgactcca ggagcggctggattttctccatctggagcttcagagccaagtttcagtcccgctagttac agtcctaattggagtccaggtccagcggcttcacctggctctccaggacctagtagccca tacatgcaaagtccaaccgacatcaccttctatgtcgccttccagtccatcatactcacc gtcgagtccaagctactcaccgacttctccaagtattctccgacatcgccaagttattct ccaacttctccaaggtattctccaacatcgccaagttattcaccaacttcgccaagatat tcaccaacttcgccaagctattctccaacatcaccgcggtattccccaacatcacctagt tattctccaacatctccgagttattctccaacttcaccgagatattcaccgacgtcacca agttattcacctacttcgccaagttactctccgacatcgcctaagtactcgccgacatca ccgaggtattctccaacttctccgagttactctccgacgtctccatcttactctccgact tcaccttcttattcaccaacgtcgccatcatactctcctacgtcaccgtcgtattctccg acatctccgaggtactctccaacttctccgtcgtattctccaacatctccccggtattca ccaacgtcaccgtcgtattcaccaacatctcctcggtattcaccaacgtctccatcgtat tcaccaacctctccttcttattctccaacttctccttcttattctccaacatcacctgat tacagtcctaattaa

DBGET integrated database retrieval system