Triticum aestivum (bread wheat): 123111478
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Entry
123111478 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123111478
09124 Replication and repair
03420 Nucleotide excision repair
123111478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123111478
03400 DNA repair and recombination proteins [BR:
taes03400
]
123111478
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123111478
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123111478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
123111478
NCBI-ProteinID:
XP_044388213
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All DBs
Position
5B:294943841..294952736
Genome browser
AA seq
331 aa
AA seq
DB search
MERSAAGVSYQRFPRVRIRELKDEYAKFELKDTDASMANALRRVMIAEVPTVAIDLVEIE
SNSSVLNDEFIAHRLGLIPLTSSAAMSMRFSRDCDACDGDGSCEYCSVEFHLAARATDSG
QTLEVTSTKDLRSTDPKVCPVDQQREYQQALGNVDAYEPDAAGDHRGILIVKLRRGQELR
LRAIARKGIGKDHAKWSPAATVTFMYEPDIRINQELMETLTLEEKQSWVESSPTKVFDID
PVTQQVTIVDPEAYTYDDEVIKKAEAMGKPGLVEINAKEDSFVFTVETTGAITAYELIMN
AITVLRQKLDAVRLQDDDGDLGELGAHLIGG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcggcggcgggcgtctcgtaccagcgcttcccgcgcgtgcggatccgcgag
ctcaaggacgagtacgccaagttcgagctcaaggacaccgacgcgagcatggccaacgcc
ctccgccgcgtcatgatcgccgaggtccccaccgtcgccatcgacctcgtcgagatcgag
agcaactcctccgtcctcaacgacgagttcatcgcgcaccgcctcggcctcatcccgctc
acctcctccgccgccatgtccatgcgcttctcccgcgactgcgacgcctgtgacggagac
ggctcctgcgagtactgctccgtcgagttccacctcgccgcccgcgccaccgactccggc
cagacgctcgaggtcacctccaccaaggacctccgctccaccgaccccaaggtctgccct
gtcgaccagcaaagggagtaccagcaggccctcggtaacgtcgacgcctacgagcccgat
gctgctggtgatcacaggggcatattaattgtaaagctgcgccgtgggcaagagctgcgt
cttcgagcaattgccaggaagggaattggaaaggaccatgccaaatggtctccagctgct
actgtgaccttcatgtatgagcctgacatacgtattaaccaagaactcatggagacactt
acacttgaggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacattgat
cctgtcacccaacaggtgacgattgtggacccagaggcatacacatatgacgatgaggtg
atcaagaaagcagaggccatggggaagccaggattggtagagatcaatgccaaggaggac
agctttgtgttcactgtggagacaacgggggccatcacagcctatgagctgattatgaac
gctatcacggtcctgaggcagaagctggacgccgttcgcctgcaagacgatgacggcgac
cttggcgagctcggcgcccaccttatcggaggctaa
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