Triticum aestivum (bread wheat): 123113196
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Entry
123113196 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123113196
09124 Replication and repair
03420 Nucleotide excision repair
123113196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123113196
03400 DNA repair and recombination proteins [BR:
taes03400
]
123113196
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123113196
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123113196
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123113196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
123113196
NCBI-ProteinID:
XP_044390302
LinkDB
All DBs
Position
5B:557482116..557490469
Genome browser
AA seq
1221 aa
AA seq
DB search
MEDDEYEEGMEMDMGGHQHLQHRGYGAEEEVEGGYAGGGDGEDEEEEARDEEEITQEDAW
AVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETLHK
ISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVKKGHDCEEVTET
AEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGSEKVLIAQEKMS
TNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATLPY
IRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDYIG
KRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRRAE
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTITS
GLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHN
SHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISPAVIPQ
AAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCSRP
LFIVENQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETTMISMTIRDLET
SRHNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNY
QLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSS
IDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRV
SGEDVIIGKTSPIPQDDAQGQATRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVR
MRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQLI
ECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRKLTAMIFL
GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAFFL
KERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM
AMAIAPRMLTHEVKGARDKHR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacgaatatgaggaggggatggagatggatatgggagggcaccagcacctc
cagcaccgggggtacggagccgaggaggaggtcgaggggggatacgccggcggcggggac
ggggaggatgaggaggaggaggcgcgggacgaggaggagattacccaggaggacgcctgg
gccgtcatctccgcctacttcgaggagaagggcctcgtgcgccagcagctcgactccttc
gacgagttcatccagaacaccatgcaggagatcgtcgacgagtcggccgacatcgagatc
cgccccgagtcgcagcacaaccccggccgccaggccgagttcgccgagacactccacaag
atcagctttggtcaaatctatctgagcaaaccaatgatgactgaagctgacggagagact
gctaccttattccccaaatcagcaaggctcaggaatctgacatactcagcaccactttat
gtagatgtatcatacagagttgtaaagaaaggacatgactgtgaagaggttacagaaact
gcggagtatccgaaagtcttcattggaaaggttccaatcatgttgcgttctagttactgc
acactgtttcaacaatctgaaaaggatctcacagaacttggagagtgcccttatgaccaa
ggaggatattttgtaatcaatggtagtgaaaaggttctcattgcccaggagaagatgagc
accaaccatgtctatgtgtttaagaagaggcaaccaaataagtttgcatatgtgggtgaa
gtccgttcaatggcagagaaccagaacagacctgctagtagcatgtttgttcggatgctt
tcccgagcaggcgcgaaagggggttcatctggtcaatatatccgtgctactctgccctac
attcgtgcagatattcccatcatcattgtgtttagagcactaggatttgttgctgacaaa
gatatactggagcacatatgctacgatttctccgatacacaaatgatggaattgctgcgc
ccatctttggaggaagcttttgtcattcaaaatcagcaggttgctctggactacattgga
aagcgtggtgctacagttggtgtaactcgagaaaaaagaataaagtatgcaaaagagata
cttcaaaaggaaatgctgccccatgttggtgtaggcgaattctgtgaaactaaaaaggca
tactactttgggtatattattcaccgcctgttgatgtgcgctcttggtcgaagagctgaa
gatgacagagatcattacggcaacaaaaggcttgaccttgcaggtccattgcttggagga
ctgttcagaatgcttttcaggaaattgacgagggatgtgaggtcatatgttcagaagtgt
gtcgataatgggaaggaagtcaatttgcaatttgctattaaagctaaaaccattactagt
ggattgaagtattcccttgctactggaaactggggacaggctaaccaagctggcacaaga
gccggtgtgtctcaggtgcttaatcgtcttacgtatgcttctacattatcacatcttcgg
aggttgaactctcccattgggcgtgaagggaaactggcaaaaccccgccaattgcataat
tctcattggggaatgatgtgccctgctgaaacacctgaaggacaggcttgtggcttggtt
aaaaatcttgccttgatggtttatatcactgttggttctgccgcaaatcctattttggaa
tttttggaagagtggggcacagaaaattttgaggagatatcaccggcagtcattcctcaa
gctgctaaaatatttgtcaatggttgttgggttggaattcataggaatcctgacctattg
gtgaagacccttcgtcgtttaagaagacagattgatgtcaacactgaagttggtgttgtt
cgtgatattcgtcttaaagaacttcgactctatactgattatgggcgttgcagtcgcccg
ctgtttatcgttgaaaaccagaggcttctaattaagaagaaacatatccgagcattgcag
caaagggagactcctgatgagggttggcatgacttggttgccaaaggatttatagagtac
atagacactgaagaggaagaaactactatgatctctatgactatacgtgaccttgaaact
tcgaggcataatccaggggaggcatattctgagacttatacgcactgtgagatccatcct
tcattgatacttggtgtgtgcgcatcaattattccttttcctgatcacaaccagtcacct
cgtaatacatatcagtctgctatgggaaagcaagccatgggaatctatgttaccaactat
cagttaagaatggacacattggcctacgttctgtactacccacaaaagcctcttgttact
actcgtgctatggagcatttgcacttcaggcagttaccagctggcattaatgcaattgtt
gctattgcatgctactctggatataaccaagaagattcggttattatgaaccaatcttca
atagatcgtgggttcttcagatcactatttttccgctcttacagagatgaggaaaagaag
atgggaactcttgtcaaagaggaatttggtcgtccaaatagggagaacactatgggaatg
cgccatgggtcttatgataaattagatgatgatggccttgcaccaccgggaacaagggtc
tctggggaagatgtcattattgggaagacatctccaattccacaagatgatgctcaaggg
caagctactagatactcaaagcgtgatcatagtacttctctgcgtcacagtgaaagtggg
atggtggatcaggttctgttgacaacgaatgctgatggtttaagatttgtcaaggttaga
atgcgatcagtgcgcataccacaaataggagataagttcagcagtaggcatggtcagaag
ggaactgttggaatgacttacacacaagaggacatgccatggacaatcgaaggcatcaca
ccggatatcattgtgaatccacatgctattccatcccgtatgactattggccagctgatt
gagtgtattatgggtaaagttgcggctcacatgggaaaggaaggagatgcaactcctttc
actgatgttactgtggataatatcagtaaagcactgcacaagtgtggctatcagatgcgt
ggatttgagaccatgtacaatggtcatactgggagaaaattgactgcaatgattttctta
ggtccaacttactaccagagacttaagcatatggtggatgacaaaattcactctagaggt
cgtggtcctgtccagatactgaccagacagccagcagaggggcgctcacgtgatggtggt
ctccgttttggagaaatggagagggattgcatgattgctcatggagctgcatttttcttg
aaggaaaggttatttgaccagagcgatgcttacagagtgcatgtttgtgagaagtgtgga
ctcattgccattgccaatctcaagaagaattccttcgaatgcagaggctgcaagaacaaa
actgacattgtccaggtccatataccgtacgcatgtaagctcctcttccaggagctcatg
gcgatggcgattgctcccaggatgctcacccatgaggtcaagggtgcgagggataagcac
cgttga
DBGET
integrated database retrieval system
