Triticum aestivum (bread wheat): 123123534
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Entry
123123534 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123123534
09124 Replication and repair
03420 Nucleotide excision repair
123123534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123123534
03400 DNA repair and recombination proteins [BR:
taes03400
]
123123534
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123123534
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123123534
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123123534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
123123534
NCBI-ProteinID:
XP_044399993
LinkDB
All DBs
Position
5D:complement(532056334..532064732)
Genome browser
AA seq
1847 aa
AA seq
DB search
MDARFAYSPAETARVQLVQFGILSPDEIRQMSVAVIEHAETMEKGKPKPGGLSDPRLGTI
DRRTKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDEK
DGKFKQALRIKNPKNRLRKIQEACKGKKVCAAGEDDLEGQDQMDTDEPVKKRGGCGAQQP
KITVDGMKMVAEFKATNKKNGDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLDP
KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGVPA
HIITEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRVRGNLMGKRVD
FSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAK
YIIREDGQRLDLRYVKKSSDQHLELGYKVERHLIDGDFVLFNRQPSLHKMSIMGHRIKIM
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMMVPKCIVSPQANRPVMGI
VQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIP
KRINLIRFSAWHDEEESRFITPGDTVVRIEKGELLSGILCKKTLGTSMGSLIHVIWEEVG
PDAARKFLGHTQWLVNYWLLQHGFSIGIGDTIADAGTMKKISDTISKAQDDVNELIKEAR
DNKLEPEPGRTMMESFENKVNQVLNKARDDSGSSAQQSLSESNNLKAMVTAGSKGSFINI
SQMTACVGQQNVEGKRIPFGFAGRTLPHFTQNDDSPESRGFVENSYLRGLTPQEFFFHAM
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI
EPQKLDSLGMKKAEFDNVFRYELDDENWRPTYMSPEDADVLKTVPDIRLVFEAEFQKLEA
DRLQLGTEIATTGDITWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAMDKLQERL
KVVPGDDAMSIEAQKNATLLFNILLRSTFASKRVLKEYRLTRESFEWVIGEIESRFLQSL
VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
VFLKPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLRTTIEEDVEFVKSYYEMP
DEDIDPDKMSPWLLRIELNREMMVDKRLSMAEIAEKIKCEFDDDLSCIFNDDNADKLILR
IRIKNDDEVPKQDEDDDVFLKKVESNMLTEMALGGIPDINKVFIKERKVNKFDENDGFTQ
KSDNKDKNKEWMLDTEGVNLLAVMCHEDVDTTRTTSNHLIEVIEVLGIEAVRRSLLDELR
AVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAA
MYAESDHLRGVTENIMLGQLAPIGTGGCELYLNDKMLEQAIELQLPSFVEGLDYGMTPAP
SPISGMMSPVPSPNFRTSPVTDHALQFSPYVGGLAFSPVPSNYSTSSGSGYCPSSPVFSP
GPGGQGYSPVSPVYSPLSPIYTPTSLSYSPVSPIHSPESPVYSPASPVFRPTSLQYSPTS
PVYSPTSLEYSPTSPSYSPTSHAYSPTSPSYSPTSHAYSPTSPSYSPTSPVYSPASFSTS
PYYNPTSPSYSPTSHSYSPTSPRYSPASPSYSPTSPNYSPTSPAYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPSRAYSPSSPMMMSPYSQLPPNYSLASPTYSPTSPSYAAQPSPSYS
PTSPCTASGGPSPDYSLTSPNYSPSASYSPPSTEPQTSDKDDDKSAP
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcggttcgcctactcgccggcggagacggccagggtgcagctggtgcagttc
ggcatcctcagccccgacgaaatccgacaaatgtcggtggcggtgatagagcatgcagag
accatggagaaggggaagccaaagcctggtggtttgagtgaccctcgtctgggcaccatc
gaccgcaggaccaagtgtgagacatgcatggctgggatggccgagtgcccgggccacttt
ggccacctcgagctcgcaaagcccatgttccacatcggcttcatcaagaccgtgctctcc
atcatgcgctgcgtctgcttcaactgctccaagatcctcgccgatgaggatgatgagaag
gatggcaagttcaagcaggctctcagaatcaagaacccaaaaaatagattgcgaaaaata
caggaggcttgcaagggcaaaaaggtttgtgctgcgggtgaggacgatcttgagggtcag
gatcagatggacaccgatgagccagtgaagaaaagaggtggctgtggtgctcagcagcca
aagatcacggtcgatggtatgaagatggttgcagagttcaaagcaacaaacaagaagaat
ggcgatcaagatcaactccctgaaccagtggagcggaagcaaattctctccgccgagagg
gttcttaatgttctcaagcgtataagcgacgaggactgtcttctgttgggcctggaccct
aaatatgcgcgtcctgattggatgatactgcaagtccttccgattcctccgccgcctgtg
agaccatctgtcatgatggacacttcctccagaagtgaggatgatttgactcatcaatta
gcaatgataattcggcataatgagaatctgaggaggcaagagagaaatggagtcccagcc
cacattataacagagtttgctcagttgttgcagttccacattgcgacatacttcgacaat
gatcttccaggacaaccacgggccactcagcgttctggacggcctattaagtcaatctgc
agcaggctgaaagcaaaagaaggccgggtcagagggaacttaatggggaagcgtgttgat
ttctcagctcggaccgtcatcacaccagacccaaatatcaacattgatgaattgggggtg
ccatggagtattgctttgaatctgacatacccagaaactgttactccatataacatcgag
aggttgaaagaactagtagaaaatgggcctcaccctcccccaggaaagacaggtgccaag
tacattatcagggaagatggccagaggctggatcttcgctatgtgaagaaaagtagtgat
cagcatttggagctgggttataaggtggaaaggcacctcattgatggagattttgttctt
ttcaaccggcaacccagtctccacaaaatgtctatcatggggcatcgcattaaaatcatg
ccctactcaactttccgcctcaacttgtctgtcacgtcgccatacaatgcagattttgat
ggggatgaaatgaatatgcatgttcctcagtcatttgagaccagagctgaagttatggag
ttgatgatggtgccaaaatgcattgtgtcacctcaagcgaatagacctgttatgggtatt
gttcaggacacacttcttgggtgccgaaaaattaccaaaagggatactctcattgagaag
gatgtatttatgaacatcttaatgtggtgggaagattttgatgggaaggtccctgcccct
gccattttgaaaccaagaccgatttggactggcaaacaagttttcaacttgattatcccc
aagcgaatcaatttaattagattttcagcctggcatgatgaagaagaaagcagatttatt
actcccggtgatactgtggtccggatagagaagggagagcttctgtctggtatactttgc
aaaaaaacgcttgggacatcaatgggaagtcttattcatgttatttgggaagaggtaggg
ccagatgccgcgcgcaagttcttgggtcatacacagtggctcgtcaactactggcttctg
caacatggtttcagtatcggaatcggggatacgattgcagatgcaggtacaatgaagaag
attagtgacacaatatcaaaagctcaggatgatgtgaatgagcttatcaaggaagcgcgt
gacaacaagttggaacctgagccaggacgcacaatgatggaatcatttgaaaataaagtg
aatcaggttcttaacaaggctcgtgatgattctgggagtagtgctcagcagagtttgtct
gagagcaacaatttgaaagctatggtcactgcaggctcaaaaggcagtttcattaatatt
tcgcaaatgaccgcttgcgtcggacagcagaatgttgaagggaagaggatcccatttggt
tttgctggtcgtacattgccccacttcacgcaaaatgacgacagtcctgaaagccgtgga
ttcgtggagaactcttaccttcgaggcctgacaccacaggaattcttcttccatgctatg
ggtggtagagaaggtctgattgatactgctgtgaaaacttccgagactggatatattcag
cggaggctcgtgaaggccatggaggacatcatggtgaaatacgatggtaccgttagaaac
tccctgggtgatgtcattcaattcttgtatggagaagatggcatggacgctgtttggatt
gaaccacagaaattggactccctcgggatgaaaaaggcagagtttgacaatgtatttcgt
tatgaactggatgatgagaactggaggcccacttacatgtcgcctgaagatgctgatgtt
ttgaagacagttcctgatatcagacttgtgtttgaggcagagtttcagaaattagaagct
gacaggttacagcttgggactgaaattgccacgactggcgacattacatggcctatgcct
gtcaacctcaagcggcttatctggaatgctcaaaagactttcaagattgatttgagaaga
ccttctgacatgcacccgatggaaattgtggaagcaatggataagttgcaagaaagactc
aaggttgtcccaggagacgatgccatgagcatcgaggctcagaagaacgctactctgctc
ttcaatatcctgctccgtagcacatttgctagcaagagggtcttgaaagaatacaggctc
acaagggaatcttttgaatgggtcatcggtgagattgaatcgaggttcctccagtctttg
gtagctcctggtgaaatgattggatgcgtggctgcacagtccattggagaaccagcaact
cagatgacactgaatactttccattatgctggggttagcgctaagaatgtcacccttggc
gtccccaggttaagggagatcattaacgtcgccaagaagataaagactccatcgctgtct
gttttcctaaagcctgaggtgagcaagaagaaagaattggccaagaatgtccagtgtgcc
ttggagtacactacactacgtagcgtgacccatgccaccgagatatggtatgatcctgat
cctctacgaaccaccattgaagaggatgtggaatttgtcaagtcatactatgaaatgcct
gatgaggatattgacccggataagatgtctccttggctgctgcgtatcgagctgaaccgt
gagatgatggtcgataagaggttgagcatggctgaaattgcagagaagataaaatgtgaa
tttgatgacgacttgtcatgcatattcaacgatgacaacgcggataagctcatccttcgt
atccgcattaaaaatgatgacgaagttccaaaacaggatgaggatgatgatgtctttctc
aagaaggttgagagtaacatgttgactgagatggcccttggaggcattccagatattaac
aaggtcttcattaaagagaggaaggtgaataaattcgatgaaaatgatggtttcactcaa
aaatcagataacaaagataagaacaaagagtggatgcttgatacagaaggtgtaaacctc
ttggccgtgatgtgccatgaggatgttgacacaacaaggacaacgagtaaccatctgatc
gaagtgattgaggttcttgggatcgaggctgtccgcaggtctctcttggatgagctgagg
gcggtgatatcttttgatgggtcttatgtgaactacaggcatctggccattctctgtgat
accatgacatacagaggtcatctgatggctattactaggcacggcataaaccgtaatgac
acggggcctctcatgagatgttcttttgaagaaacggtggatatcttgcttgatgctgcc
atgtatgcagaatccgatcacctgagaggcgtcacagagaacatcatgcttggccagctt
gctcctattggcacaggaggctgtgagttgtacctgaatgacaagatgctggagcaggcc
attgagcttcaactcccgagttttgttgaaggcctggactatggcatgacaccagcacct
tcacccatctccggaatgatgtcaccggtgccgagtccaaatttccgaacttcccccgtt
acagatcatgctcttcagttctcgccatatgttgggggcctggcattctcacccgtccca
tcaaactatagcacatcctctgggagtggttactgtccatcttctccggtgttcagccca
gggccaggaggacaaggctacagtcccgtctctccagtatactcgccactatctcctatt
tatacccccacatctctgagctacagccccgtatcgcccatccatagtccagaatcgcca
gtttatagtccagcatcgccagtttttagaccgacatctcttcaatacagcccgacgtcg
ccagtttatagcccgacgtctcttgaatacagcccgacgtcgccatcttatagcccaaca
tctcatgcatacagcccgacatccccatcttatagcccaacatctcatgcatacagcccg
acatccccatcttatagcccaacatcgccagtttatagcccggcatctttttcgacgtcg
ccatattataacccaacatcgccatcatacagccccacttcgcattcatacagccctact
tcgcctcgttacagcccggcatcaccctcgtacagccctacttcaccgaactatagccct
acatcccctgcatacagcccaacttcaccttcatacagccctacgtcaccaagctacagc
ccaacttcgccttcatacagtcctacatcgccctcttacagtccttcacgtgcttattct
ccaagcagcccaatgatgatgagtccgtatagtcagcttcctccaaactacagccttgcc
tcaccgacttactcacctacctcaccgtcatatgctgcacaaccaagtccatcatacagc
ccaacaagcccgtgcactgcctctggaggacctagcccagattacagcctaacttccccc
aattacagccccagcgcaagctactccccgccatccaccgagccacaaactagtgacaag
gacgacgacaagagtgctccttga
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integrated database retrieval system
