KEGG   Triticum aestivum (bread wheat): 123135640
Entry
123135640         CDS       T07757                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
taes  Triticum aestivum (bread wheat)
Pathway
taes03020  RNA polymerase
taes03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:taes00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123135640
  09124 Replication and repair
   03420 Nucleotide excision repair
    123135640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taes03021]
    123135640
   03400 DNA repair and recombination proteins [BR:taes03400]
    123135640
Transcription machinery [BR:taes03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123135640
DNA repair and recombination proteins [BR:taes03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123135640
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 123135640
NCBI-ProteinID: XP_044410738
LinkDB
Position
6B:complement(46093160..46093842)
AA seq 139 aa
MSGMEEEENAAELKIGEEFLKAKCLMNCEVAIILEHKWEQLQHMSDGGADQVSQVFEKSQ
AYVKRFSRYKNPDAVRQVRETLSRYSLVEFELCTLGNLCPDTADEAKALVPSLVPGGRFD
SDDRVDKMLNDLSLIKKFE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtccggcatggaggaggaggagaacgccgccgagctcaagatcggcgaagagttcctg
aaggccaagtgcctgatgaactgcgaggtggcgataatcctggagcacaagtgggagcag
ctgcagcacatgtcggacggcggcgccgaccaggtctcgcaggtgttcgagaagtcgcag
gcctacgtcaagcgcttcagccgctacaagaaccccgacgccgtccgccaggtccgcgag
acgctctcccgctacagcctcgtcgagttcgagctctgcaccctcggcaacctctgcccc
gacaccgccgacgaggccaaggcgctcgtcccctccctcgtccccggcggcaggttcgac
agcgacgaccgcgtcgacaagatgctcaacgacctctcactcatcaagaagttcgagtag

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