Triticum aestivum (bread wheat): 123155625
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Entry
123155625 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123155625
09124 Replication and repair
03420 Nucleotide excision repair
123155625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123155625
03400 DNA repair and recombination proteins [BR:
taes03400
]
123155625
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123155625
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123155625
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123155625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
123155625
NCBI-ProteinID:
XP_044429705
LinkDB
All DBs
Position
7B:complement(374116192..374124820)
Genome browser
AA seq
1852 aa
AA seq
DB search
MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVVIEHAETMERGKAKPGGLSDPRLGTI
DRKIKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDTK
FKQALKIRNPKNRLRRIYDACKSKKICAGGDELEVQDQQDADEPVKKRGGCGAQQPNITV
DGMKMVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLIN
LIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNEVKELIKQAQEKNL
EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRLQ
LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVVP
GDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK
PEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDEDI
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRIT
NDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYGKVNKFDESEGFKP
DNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY
LRGVTENIMLGQLAPIGTGGCGLYLNDQMLQQAIELQLPSYVEGLDYGMTPARSPMSATP
YRDGGMMSPMLSPNFRASPITDAQFSPYVGGMAFSPVPSNYSPSSGGGYSPSSPVFSPGP
GHGYSPTSPSYSPASPSYSPTSPSYTPGSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYS
PTSPSYNPSSAKYSPSHAYSPSSPRMMSPYSQTSPNYSPTSPTYSPTSPSYAQPSPSYSP
TSPHTTSGGPSPDYSPTSPNYSPSASYSPTAPGYSPSSTGPQTTDKDDETVD
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgaggttcccgtactcgccggctgaggtggccaaggtgcagctcgtgcagttc
ggcatcctcagcccggatgaaatcagacaaatgtcagtggtggtgatagagcatgcagag
actatggagagggggaaggcaaagcctgggggtttgagtgaccctcgtttgggcaccatt
gaccggaagatcaagtgtgatacatgtatggctgggatggccgagtgcccgggtcacttt
ggccaccttgagcttgcaaagccaatgttccacatcggcttcatcaagaccgtactctcc
ataatgcgctgtgtgtgcttcaactgttccaagatcctggcggatgaggaggataccaag
ttcaagcaggctctgaaaatcaggaacccaaaaaatagattaagaagaatatatgatgct
tgcaagagcaaaaagatttgtgctgggggtgatgaacttgaggttcaagatcagcaggat
gctgatgagccagtgaagaaaagaggcggttgtggtgctcagcagccaaatatcacagtt
gatggtatgaagatggttgcagaatttaaagcaacaaagaagaaaagtgatgatcaagat
caactccctgaaccagtggagcgaaagcaaattctctctgccgagagggtccttaatgtt
ctcaagcgtataagtgatgaggactgtcttttgttgggcctgaaccctaagtatgctcgt
cctgattggatgatactgcaagtccttccaattcctccaccacctgtcagaccatctgtt
atgatggatacttcctccagaagtgaggatgatttgactcatcaattagcgatgataatt
cgacataatgagaatttgaggaggcaagagagaaatggagccccagctcacattataact
gagtttgctcagttgttgcagtttcacattgcaacgtacttcgacaatgatcttcctgga
caaccaagggccactcagcgttctggaaggcctattaagtcaatatgcagcaggctgaaa
gcaaaagaaggccggattagaggaaacttaatggggaagcgtgttgatttctcagctcgt
actgtcatcacaccagatccgaatatcaacattgatcaattgggggtgccatggagtata
gctttgaatctgacatacccagaaactgtcactccatataacattgagaggttgaaagag
ctagtagaatatgggcctcacccacccccaggtaagacaggtgcaaagtacatcatcagg
gaagatggtcagaggctggatcttcgctatgtgaagaaaagtagtgatcagcatttggag
ctgggttacaaggtggaaagacacctcaatgatggagattttgttcttttcaaccggcaa
ccaagtcttcataaaatgtctatcatggggcatcgtattaaaattatgccgtactcaact
ttccgcctgaacctgtctgtcacatcaccatacaatgcagattttgatggggatgaaatg
aatatgcatgttcctcagtcatttgagacaagagccgaagttttagagttgatgatggtg
ccaaaatgtattgtctcgcctcaagcgaatagacctgttatgggtattgtccaggacaca
cttcttgggtgtcgaaaaataaccaaaagggacactcttattgaaaaggatgtatttatg
aacatcctaatgtggtgggaagattttgatgggaaggttcctgcacctgccattttgaga
ccaaggccgatttggactggcaaacaagttttcaacttgattattccgaagctaatcaat
ttaataagattttcagcctggcatgctgaaacagaaagtggatttattactccaggagat
actatggtcaggatagagaagggagagcttctgtctggtacactttgcaaaaaaacactt
ggaacgtcaactggaagtcttattcatgttatttgggaagaggtagggccagatgctgca
cggaagttcttgggtcatacacagtggctggtcaactactggcttctgcaaaacggtttc
agtattggtattggagatacaattgcagatgctgctactatggagaagattaacgagaca
attggaacagctaagaatgaggtgaaggagcttattaagcaagcacaagagaagaacttg
gaacctgagccaggacgcaccatgatggaatcattcgaaaaccgagtaaatcaggttctt
aacaaggctcgtgatgatgctgggagtagtgctcagaagagtttgtctgagagcaacaat
ttgaaagctatggtcactgcaggctcaaaaggcagtttcattaatatttcgcaaatgact
gcttgtgtcggacagcagaatgttgagggcaagcggattccatttggtttcgttgatcgt
acattgccccacttcacgaaagatgactacggccctgaaagtcgcgggtttgttgagaac
tcttaccttcgaggtctgacaccacaagaatttttcttccatgctatgggtggtagagaa
ggtttgattgatactgctgtgaaaacctctgagacgggatatattcagcggaggctcgtg
aaggctatggaggacattatggtgaaatatgatggtactgtgcgaaattcgctgggtgat
gttattcaattcttgtatggagaagatggcatggatgctgtttggattgaatcacagaaa
ttggactccctgaagatgaaaaaggccgagtttgataatgtatttcgttatgaacttgat
gatgagaactggaggcctacttacatgttgcctgaccatgttgatgatttgaagaccatt
cgtgaattcagaaatgtgttcgaggcagaggttcagaaattagaagctgacagattacag
cttgggactgaaattactacaactggcgacaatacatggcctatgcctgtcaacctcaag
cggcttatctggaatgctcagaagactttcaagattgatttaagaagaccttctgacatg
cacccaatggaaattgtggaagcaatagataagctgcaagaaagacttaaggttgtccct
ggtgacgatgccatgagcatcgaggctcagaagaacgctactttgttcttcaatatcctg
cttcgtagcacatttgctagcaagagggtcttgaaagaatacaggcttacaaaggaatcc
ttcgaatgggtcattggtgagattgaatcgagattcctccagtctttagtagctcctggt
gaaatgattggatgtgtggctgcacagtccattggagaaccggcaactcagatgacactg
aatactttccattatgctggtgttagtgctaagaatgttacccttggagttcccaggtta
agagagatcattaacgtcgccaagaagataaagactccatctctgtctgttttcctaaag
cctgaggtgagcaagaaaaaagaattggctaagaatgtgcagtgtgccttggagtacact
acactgcgtagtgtgacccatgccactgagatatggtatgatcctgatcctctaggaacc
atcattgaagaggatgtggaatttgtcaggtcatattatgaaatgcctgatgaggatatt
gacccagataagatctctccttggctgctgcgtattgagctgaaccgtgagatgatggtt
gataagaaattgagcatggctgatattgcagagaagatcaatcatgaatttgacgatgac
ttgtcatgcatattcaatgatgataatgcagataagctcatccttcgtgtccgcattaca
aacgacgaagctccaaaaggagaaatacaggatgaatctgctgaggatgatgtcttcctc
aagaagattgagggtaatatgttgactgagatggcccttcgaggcattccagatattaac
aaggtcttcatcaaatacgggaaggtcaataaatttgatgaaagtgagggtttcaaacca
gataacgagtggatgcttgatacagaaggtgtaaacctcttggccgtgatgtgtcatgag
gatgttgattctacaaggacaacaagtaaccatttgattgaagtgattgaggttcttggg
attgaggctgtccgcaggtctctcttggatgagctgagggtggttatatcttttgatggg
tcttatgtgaactacaggcatctggccattctctgtgatacgatgacatacagaggtcac
ctgatggctattactaggcatggtataaatcgtaatgacacagggcccctcatgagatgt
tcttttgaagaaacagtggatatcttgcttgatgctgctgtatatgcggaatctgattac
ctaagaggtgtgactgagaacattatgcttggccagcttgctcctattggtacaggaggc
tgtggattgtatctgaatgaccagatgctgcagcaggcgattgagcttcaactcccaagc
tatgttgaaggtctggactatggcatgacaccagcgcgttcacccatgtccgcgacaccg
taccgtgatggaggaatgatgtcaccaatgctgagtccaaatttcagggcttccccaatt
acagatgctcagttctcaccatatgttgggggcatggcattctcacccgtcccgtcaaac
tacagcccatcctctggaggtggttacagtccatcttctccggtgttcagcccagggcca
ggacatggttacagtcccacttctccatcatacagccctgcatcgcccagctacagcccc
acctctccatcatatacgcctggctctccttcctacagcccgaccagtccatcatactct
ccgaccagtccatcatactcgccaacatccccgagctacagccccacatctcctagctac
agccccacatctccgagctacagcccaacatcaccaagctatagccccacatcgccgagc
tatagtccaacatcaccggtttatagtccgacctcgccagcatacagcccaacatctcct
gcatacagcccgacgtcgccatcttacagcccaacgtcgccatcatacagccctacttct
ccctcgtacagcccgacatcaccctcatacagccccacgtcaccctcatacagcccgaca
tccccctcatacagccctacctcgccctcatacagccctacatcgcctgcatacagccct
acatcgcctggttacagcccgacgtcaccgagctacagccctacttcaccgaactacagc
cccacttcaccgagctacaatccttcttcggccaagtacagtccttcacatgcttattct
ccaagcagtccaaggatgatgagcccgtacagtcagacttctccgaactacagcccgacc
tcaccgacctactcgcccacctcaccatcatatgcacaaccaagcccgtcatacagccct
acaagcccgcacactacctctggaggacctagcccagattacagcccgacatctccaaac
tacagccccagcgcaagctactccccgactgcaccgggctactccccgtcatccaccggc
ccgcagacaactgacaaggacgatgagactgttgactag
DBGET
integrated database retrieval system
