Triticum aestivum (bread wheat): 123191235
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Entry
123191235 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
taes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123191235
09124 Replication and repair
03420 Nucleotide excision repair
123191235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123191235
03400 DNA repair and recombination proteins [BR:
taes03400
]
123191235
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123191235
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123191235
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123191235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
123191235
NCBI-ProteinID:
XP_044459984
LinkDB
All DBs
Position
2A:785139124..785147532
Genome browser
AA seq
1858 aa
AA seq
DB search
MDARFPHSPAEVAKVKLVQFGVLSPDEIRQMSVVMIEHAETTERGKVKSGGLSDPRLGTI
DRKLKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILADEEDTK
FQQALKIKNPKNRLRRIYDACKSKKVCSGGEDLEGQDQQDTEEPVKKKGGCGAQQPNITV
DGMKMVAEFKTTKKKNDEQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPEFAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKMTKRDTLIEKDVFMNILMWWEDFDGKVPAPTILKPRPIWTGKQVFNLIIPKLIN
LIRFSAWHAETENGFTTPGDTVVRIEKGELLSGTLCKKTLGASSGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADADTMEKINETIANAKIEVNGLIKQAQEKEL
EPEPGRTMMESFENRVNQVLNKARDESGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKDEFDNVFRYELNDMNWKPNYMLPDHVEDLKTIREFRNVFEAELQKLEVDRLQ
LGQEITTTGEGTWPMPVNLKRLIWNAQKTFKIDLRKPSDMHPMEIVEAIDKLQERLKVVP
GDDAMSIEAQKNATLLFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK
PGVNSRKESAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIPEDVDFVRSYYEMPDEDV
DPDKMSPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRIA
NDEAPPKGGEAQGESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKKGKVNKFDEKEGF
KGEEEWMLDTEGVNLLAVMCHEDVDPSRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF
DGSYVNYRHLAILCDMMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAES
DYLRGVTENIMLGQLAPIGTGGCGLYLNDQMLKQAIELQLPSYIDTLDYGVTPARSPSGT
PYHDGMMSPLLSPNFRVSPLTDAQFSPYVGGMAFSPMPSNYSPSSGGYSPSSPVFSPGPG
HSYSPTSPSYSPASPSYSPASPSYTPGSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPAYCPTSPSYSPTSPAYCPTSPAYSPTSPAYCPTSPAYSPLSPSYNPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPTSPSYRPTSPSYSPTSPAYSPSSPGYCP
TSPSYSPTSLSYSPSSAKYSPSNIYSPSSPRMMSPYSQTSPNYSPTSPSYSPTSPSYAQP
SPSYSPASPITTSGGPSPDYTPTSPNYSPTASYSPTAPGYSPISTEPQTSDKDEETAP
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcggttcccgcactcgccggccgaggtggccaaggtcaagctcgtccagttc
ggcgtgctcagccccgatgagatcagacaaatgtcggtggtcatgatagagcatgcggag
actacggagaggggcaaggtgaagtccgggggtctgagcgacccccgtttgggcaccatt
gaccggaaactcaagtgcgacacatgtatggctgggatggccgagtgcccgggccacttt
ggccacctcgagcttgcgaagcccatgttccatatcggcttcatcaagaccgtgctctct
gtaatgcgctgcgtgtgcttcaattgctccaagatcctcgcggacgaggaagataccaag
ttccagcaggctctgaaaatcaagaaccccaaaaatagattaagaagaatttatgatgct
tgcaagagcaaaaaggtttgctctgggggtgaagaccttgagggtcaggatcagcaggac
actgaagagccagtgaagaaaaaaggtggttgtggggctcagcagccaaatatcacagtt
gatggtatgaagatggttgcagagtttaaaacaacaaagaagaaaaatgatgagcaagat
caactcccggaaccagtggagcgaaagcaaattctctccgccgagagggtccttaatgtt
ctcaagcgtataagtgacgaggactgtcttttattgggcctgaaccctgaatttgctcgt
cctgattggatgatactgcaagtcctcccaattcctccgccccctgtgagaccatctgtc
atgatggatacttcctccagaagcgaggatgatttgactcatcaattagcgatgataatt
cgacataatgagaatttgaggaggcaagagagaaatggagccccagctcacattataaca
gagtttgctcagctgttgcagtttcacattgcaacatacttcgataatgatcttcctgga
caaccaagggccactcagcgttctggaaggcctattaagtcgatttgcagcaggctgaaa
gcaaaagaaggccggattagaggaaatttaatggggaagcgtgttgatttctcagctcgt
accgtcatcacaccagatccgaatatcaacattgatcaattgggggtgccatggagtatt
gctttgaatctgacatacccagaaactgtcactccatacaacattgagaggttgaaagaa
ctagtagaatatgggcctcaccctcccccaggcaagacaggagcgaagtacattattagg
gaagatggccagaggctggatcttcgctatgtgaagaaaagtagcgatcagcatttggag
cttggttacaaggtggaaaggcacctcaatgatggagattttgttcttttcaaccgacaa
cccagtctccacaaaatgtctatcatgggccatcgcattaaaattatgccctactcgact
tttcgcctgaacttgtctgtcacttcaccgtacaatgctgattttgatggggatgaaatg
aatatgcatgttcctcagtcatttgagaccagagctgaagttttagagttgatgatggtg
ccgaaatgtattgtgtcacctcaagcaaatagacctgtcatgggtattgtccaggacaca
cttcttgggtgtcgaaaaatgaccaaaagggatactctcatcgaaaaggatgtatttatg
aacatcttaatgtggtgggaagattttgatgggaaggtcccagcccctaccattttgaaa
ccaaggccgatttggactggcaaacaagttttcaacttgatcatccccaagttaattaat
ttaattagattttcagcctggcacgctgaaacagaaaatggatttacaactcctggtgat
actgtggtccggatagagaagggagagcttctatctggtacactttgcaaaaaaacactt
ggggcatcaagtggaagtcttattcatgttatttgggaagaggtaggtccagatgcggca
cggaagttcttgggtcatacacagtggctggtcaactattggcttctgcaaaatggtttc
agtattgggatcggggatacaattgcagatgcagatactatggaaaaaattaatgagaca
atcgcaaacgccaagattgaagtgaatgggcttattaagcaagcgcaagagaaggagctg
gaacctgagccaggacgcacgatgatggaatcgtttgaaaatagagtaaatcaggtcctt
aacaaggctcgtgatgaatctggcagtagtgcccagaagagtttgtccgagagcaacaat
ttgaaagctatggtcactgcaggctcaaaaggcagtttcattaatatttcacaaatgact
gcttgtgtcggacagcagaacgttgagggcaagcggattccatttggttttgttgatcgt
accttgccccacttcacgaaagatgactacggccccgaaagccgtggatttgtggagaac
tcttaccttcgaggcctgacaccacaggaatttttcttccatgctatgggtggtagagaa
ggtttgattgatactgctgtgaaaacttctgagacaggatatattcagcggaggctcgtg
aaggctatggaggacatcatggtgaaatatgatggtaccgtgagaaactcccttggcgat
gtcattcaattcttgtatggagaagacggcatggatgctgtttggattgaatcccagaaa
ctggactccctgaagatgaaaaaggatgagtttgataatgtgttccgttatgaactgaat
gatatgaactggaagcctaattacatgctgcctgaccatgttgaggatttgaagactatt
cgtgaattcagaaatgtgtttgaggcagagcttcagaaattggaagttgacagattacaa
cttgggcaagaaattaccacaactggcgagggtacatggcctatgcctgtcaacctcaag
cggcttatctggaatgctcagaagactttcaagattgatctaagaaaaccttctgacatg
cacccaatggaaatcgtggaagcaattgataagctgcaagaaaggctcaaggttgtccct
ggcgacgacgccatgagcattgaggctcagaagaacgctactctgctcttcaatatcctg
cttcgcagcacatttgctagcaagagggtcttgaaagaatacaggcttacaaaggaatct
ttcgaatgggtcattggtgagattgaatcgagattcctgcagtctttggtggctcctggt
gaaatgattggatgtgtggctgcacagtccattggagaaccagcaactcagatgacgctg
aatactttccattatgctggtgttagtgctaagaatgttacccttggtgttcccagatta
agagagattatcaacgtcgccaagaagataaagactccatctctgtctgtcttcctaaag
cctggggtgaacagcaggaaagaatcggccaagaatgtccagtgtgccctggagtacacc
acgctgcgtagtgtgacccatgccactgagatatggtatgatcctgatcctctaggaacc
ctcattcccgaggatgtggactttgtcaggtcatactatgagatgcccgatgaggatgtc
gacccggataagatgtctccttggctgctgcgtattgaactgaaccgcgagatgatggtt
gataagaagttgagcatggctgatattgcagagaagatcaatcatgagtttgatgacgac
ttgtcatgcatattcaacgatgacaacgcggataagctcatccttcgtgtccgtatcgca
aacgacgaagctcctccaaaaggaggagaggcacagggtgaatctgccgaggacgatgtc
ttcctcaagaagattgaggggaacatgttgactgagatggcccttcgaggcattccagat
attaacaaggtcttcatcaaaaaggggaaggtgaataaatttgatgagaaggaaggtttc
aaaggagaagaggagtggatgcttgatacagaaggtgtaaacctcttggccgtcatgtgt
catgaggacgttgatccttctaggacaacaagtaatcatttgattgaagtgattgaggtt
cttggcatcgaggctgtccgtaggtccctcttggatgagctgagggtggtgatatctttt
gatgggtcttatgtcaactaccggcatctggccattctctgcgatatgatgacgtacaga
ggtcacctgatggcgattactaggcacggcataaatcgtaacgacacagggcctctcatg
agatgttcttttgaagagacggtggatatcctgcttgatgctgctgtatatgctgaatct
gattacctgagaggtgtcacagagaacattatgcttggccagcttgcacctattggtaca
ggagggtgtggattgtatctgaatgaccagatgctgaagcaggccattgagctccaactc
ccgagctatattgacactctggactatggtgtcacaccggcgcgttcaccctctgggaca
ccgtaccatgatggaatgatgtctccattgctgagcccgaatttccgggtttcccccctc
acagatgctcagttctcgccgtatgttggcggcatggcgttctcgcccatgccgtcgaat
tacagcccgtcctcggggggttacagtccatcttctccggtgttcagcccagggccagga
cacagctacagccccacttctccgtcatacagccccgcatcacccagctacagccctgca
tcgccatcatatactcctggctctccttcctacagtccgagcagtccatcatactctcca
accagtccatcatactctcccacatctccgagctacagccccacatctcctagctacagt
ccaacctctccggcatactgtcccacttcgccaagctacagtccaacctctccggcatac
tgcccgacatctcctgcatacagcccgacctctccagcatactgcccgacgtctccggca
tacagcccgttgtcgccatcttataacccaacgtcgccatcttatagtccgacatctcct
tcatacagcccgacttcaccatcttatagcccaacatcgccatcatacagccccacatct
ccttcatacagcccttcatcaccaacttatagcccgacgtcgccctcatacagaccgaca
tcgccctcgtacagcccgacatcacctgcatacagtccgtcatcgcctggttactgcccg
acgtcaccgagctacagccctacttcactgagctacagcccttcgtcggccaagtacagt
ccttcaaatatctattctccaagcagcccaaggatgatgagcccgtacagtcagacttct
ccaaactacagcccgacctcaccgtcttactcgcccacctcaccgtcgtatgcgcaacca
agcccgtcatacagcccggcaagcccgatcactacctctggaggacctagcccagattac
accccaacttctccaaactacagccccactgcaagctactcccccaccgcaccgggctac
tcgccgatatccaccgagccgcaaactagtgacaaggacgaggagactgctccctga
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integrated database retrieval system
