Tyto alba (Barn owl): 104357057
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Entry
104357057 CDS
T07816
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04020
Calcium signaling pathway
tala04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104357057 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104357057 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tala04040
]
104357057 (GRIN1)
Ion channels [BR:
tala04040
]
Ligand-gated channels
Glutamate (ionotropic)
104357057 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
104357057
NCBI-ProteinID:
XP_042642451
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESFSAPAAERGRSPRLAAPAPWRLVL
PACANQPCRMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGG
DACVPHRQLLQLE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcctcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcaca
gtcccaccatactctcaccaggccaatgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaccct
ggaaccaaaaacgtgacgtcactgctgctggaggctaaggagctggaggctcgtgtcatc
atcctttctgccagtgaggatgatgcggctacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctg
cgttacgcccctgatggcgtgatcggtttgcagctcatcaatgggaagaacgagtcagcc
cacatcagtgacgctgttgcagtggtggctcaggctgtgcacgacttgtttgagaaggag
aatatcacagacccaccacggggctgcgtgggcaacaccaacatctggaagacaggaccc
cttttcaagagggtgttgatgtcctccaagtactcagagggtgtcactggacgggtggag
ttcaatgaggacggggacagaaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaagttgggatttacaacggcagccatgtcttgaccaacgaccggaagatt
atctggccagggggagaaacggagaaacctcaaggctatcagatgtcgaccaagttgaag
attgtgacaatccaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggaca
tgcagggaggaattcaccatcaatggagatcctgtgaaaaaggtcttttgcactggaccc
aacgagaccatcccaggacgccccaccgtggcactgtgctgctacggcttctgcatcgac
ctgctcatccggctggcaggggtgatgaacttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggttaacaacagcaacaagaaggagtggaacgggatg
atgggggaactgctgagcggccaagcggacatgattgtggctcccctcaccatcaacaac
gagcgggcacagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctt
gtgaagaaggaaatcccccgcagcaccttggactcgttcatgcagcctttccagagcacg
ctttggctcctggtgggcttatctgtgcacgtggtggcagtgatgttgtaccttttagac
cgattcagcccatttggccggttcaaagtgaacagcgaggaggaggaggaagatgccctg
accctctcctcagccatgtggttctcctggggagtcctgctgaactccggcatcggagaa
ggtgctccccggagtttctctgcccgtattcttggcatggtgtgggctggatttgctatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgag
gagagaattacgggcattaatgacccccggctgcgcaacccctcggataagttcatctac
gccacggtgaagcagagctcagtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcatatggagaagcacaactacgagagcgctgccgaagccatccaggcagtg
agggacaacaagctccacgccttcatctgggactccgcggtgctggagtttgaagcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctccggctttgggatcggg
atgcgcaaggacagcccgtggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggaaaggtcacactcattggcacgaaagcaattggggaggaatcgttctcagcgccc
gccgcagagcgcggccggtccccacggctcgctgcccccgcaccatggcggctggtgctc
ccagcctgcgctaaccagccctgcagaatggtccctcaggagtgccagagagacaggctg
gcaccatggagccaagacagccctgggaagctaccaccccactctgaacgtcctagcgcc
caccatcacccgagctgcacagcctctccgcggcacatcatccccaccgccccaggagga
gatgcatgtgttccccataggcagctcctgcaactcgaatag
DBGET
integrated database retrieval system
