Tyto alba (Barn owl): 104362392
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Entry
104362392 CDS
T07816
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104362392 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tala04090
]
104362392 (VCAM1)
04091 Lectins [BR:
tala04091
]
104362392 (VCAM1)
CD molecules [BR:
tala04090
]
Proteins
104362392 (VCAM1)
Lectins [BR:
tala04091
]
I-type lectins (Siglecs)
104362392 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
C2-set
ICAM_N
DUF2808
Ig_6
C1-set
Ig_C17orf99
ICAM1_3_5_D2
V-set_CD47
Herpes_gE_N
Ig_4
Syndecan
Motif
Other DBs
NCBI-GeneID:
104362392
NCBI-ProteinID:
XP_032856261
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MGRTSQVVLIILYALMAVKAFEMEIIPANRIVAQIGETLILTCNTSGCASPSFSWRTQMD
NPLGGTVNNHRTYSTLTMNPVSIVNSHDYLCTVFCGEKEKKEKSIKVELYSFPSDPIIEI
SPSLIAGEPVTVICKIPDVYPSDRLEVLLKKEGHVLHEESFYTDDSTNAKTKTVTYSFNP
MTEDIGKEITCVAKLPIPNMDFEPKERVTSQKLNANFGPQNTIITKSPGSSSMEGDSLKL
TCVTEGNPPPQIVWRKHLADESIQHLIENNVLSIPYARFTDSGLYICEAINLVTNKTEKA
TVDVVIQGAPNIAKLSIEPSTTVQEGENVSIQCSAESNPPPKIILRRKSDSADMGPYSEG
RILLPSVTFLSGGDYECVAENKFGKSKSEITLNVEYGPNNTMISVSPATTVKEGETVTMK
CTSSGNPAPVISWKKKKATGESEKIFKGATLTIQNIKSQDLGLYECEAYNQFGKEEKAVK
LLVQVPPQNITVLVYPSENVKEGENVTITCSTYSNPPSQMVLKKVHQEKEIILPAVNGTF
ILYNVTKNDTGRYLLDVFNEAGNNVKVIEISVVGRLEKNDQMIPLIIAFSCVTAIAIPVV
AILIYVSRKAKINGSYSLVKALSLKV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaacaagccaagttgtgctaataattttgtatgcgttaatggctgttaaagct
tttgaaatggagattatacccgctaacagaatcgttgcacagattggagaaacactcatc
ctcacatgcaatactagtggctgtgcatcaccaagtttttcctggagaacccagatggac
aacccccttggaggaacagtgaacaatcataggacgtactctaccttgactatgaatcca
gttagtattgtgaattctcatgattatctgtgtactgtcttctgtggtgagaaagagaaa
aaagagaagagtatcaaagttgaactttactctttccccagtgatcctatcattgagatc
agcccatccttgattgctggagaaccagtcactgtcatctgtaaaattcctgatgtgtat
ccttctgatcgcctggaagtactcctaaagaaagagggacatgttcttcatgaggaaagt
ttttatacagatgacagcacaaatgcaaagaccaaaactgtgacatattcatttaatccc
atgactgaagatatcgggaaagagattacctgtgtggccaagttaccaattcctaatatg
gactttgaacccaaagaaagagtaacatctcagaaactaaatgcaaattttggcccacaa
aatactatcattactaaatctccaggcagctcatcaatggaaggagactctctaaaactc
acttgtgtgactgagggtaatccaccgccacaaatagtttggagaaaacatctggctgat
gaaagcattcagcatctgatagaaaacaatgtcctttctattccctatgcccgtttcact
gattcaggactgtacatctgtgaagcaattaatctggtaactaataaaacagagaaagca
actgtggatgttgttatacaaggtgctccaaacattgccaaactctccattgagccttct
actacggttcaagaaggagaaaatgtttccatacaatgttctgctgagagtaaccctcct
cccaagattattttaaggagaaaatctgacagtgcagacatggggccttacagtgagggg
agaattctccttccatctgtgacattcttaagtggaggagactatgaatgtgtagcagaa
aataagttcgggaaaagtaaaagtgaaataacacttaatgtggaatatggaccaaataat
acaatgatctctgttagccctgctactactgttaaagaaggagaaactgtgacaatgaaa
tgtactagttctggtaatccggccccagtgatctcttggaagaaaaagaaggccactggg
gagtctgagaaaatttttaaaggtgcaactttaactatacagaacataaaaagtcaagat
ttggggctttatgaatgtgaagcttataatcaatttggcaaagaagaaaaagccgtgaaa
ttacttgttcaagttcctccccaaaatattactgtgttagtatatccatcagaaaatgtt
aaagaaggagaaaatgtcactattacatgtagcacatacagtaacccaccatcacagatg
gtcctgaaaaaagtccatcaggagaaagaaattattctgccagcagtgaatggaacattt
atactctacaatgtcaccaaaaatgatacaggcagatacttgcttgatgttttcaatgag
gctggaaataacgtcaaagtgattgagatatctgttgtgggaagattggaaaaaaacgat
caaatgataccactgattattgcattctcctgtgtaacagcaatagcaatacctgtagtt
gcaattttgatctacgtgtcaagaaaggcaaagataaatggatcctacagtcttgtaaaa
gcactaagtctgaaagtgtga
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