Trichlorobacter ammonificans: GEAMG1_0034
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Entry
GEAMG1_0034 CDS
T09459
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tamm
Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tamm03009
]
GEAMG1_0034 (rimO)
Enzymes [BR:
tamm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GEAMG1_0034 (rimO)
Ribosome biogenesis [BR:
tamm03009
]
Prokaryotic type
ribosomal protein modification factors
GEAMG1_0034 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
CAH2029856
LinkDB
All DBs
Position
GEAMG1:complement(68259..69608)
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AA seq
449 aa
AA seq
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MSNVEKQKVSMVSLGCPKNLVDAEVMLGVLANQGYEITTEEKDADIIIVNTCSFIKEARE
ESVEAILDLADRKHDGRCHTLIVAGCLPQRYQEELAAELPEVDIFIGTGDYPRVAEILAE
KAEAAGQIKYVGDPNYIFDETLPRLNSSPGWYAYLKIGEGCSNCCTYCAIPSIRGAYRSR
PQEALLAEARRLVAGGVRELILVSQDTTKYGTDLTDNSSLSGLIRALATIEELRWIRVLY
AYPDGIDDELIELLKTEPKLCKYLDIPIQHISTPVLQRMNRRSTEEQIRTLIARLRSEIP
GITLRTSLIVGFPGETMEDFTELLRFVEQSRFDRLGVFCYSKEEGTPAAEMPDQVSERVK
RERHRKLMKAQGRVSFRSNRALVGTVEQVIVEGYSEETELLLKGRTSRQAPDIDGQVYIT
AGQANVGDIVPCRITDSSDYDLVAEMMEP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacgtggaaaagcagaaagtcagcatggtcagcctgggctgccccaagaacctg
gtggatgcggaagtgatgctgggggtcctggccaaccagggatacgagatcaccaccgag
gaaaaggatgcggacatcatcatcgtcaacacctgttccttcatcaaggaggcccgggag
gagagcgtggaggcgatcctggacctggcggaccgcaagcatgacggccgctgccacacc
ctgatcgtggccggctgccttccccagcgctaccaggaggaactggcggcagagctgccg
gaggtggatatcttcatcggcaccggcgactacccccgggtggcggaaatcctggcggaa
aaggcggaggccgcaggacagatcaagtacgtgggtgaccccaactacatcttcgacgag
accctgccgcggctcaactcctcccccggctggtacgcctacctgaagatcggcgagggc
tgctccaactgctgcacctactgcgctatcccaagcatccgcggcgcctaccgctcacgt
ccccaggaggccctgctggctgaagcgcggcgcctggtggccggcggggtccgggaactg
atcctagtttcccaggacaccaccaagtacggcaccgacctgaccgacaacagcagcctg
tccggcctgatccgcgccctggccaccatcgaggagctgcgctggatccgggtgctctac
gcctacccggacggcatcgacgacgagctgatcgaactgctgaaaaccgagcccaagctc
tgcaagtacctggatatcccgatccagcacatcagcaccccggtgctgcaacggatgaac
cgccgcagcaccgaggagcagatccgtaccctgatcgcccgcctgcgcagcgagattccg
ggaattaccctgcgcacgtcgctgatcgtcggctttcccggcgaaaccatggaggacttc
accgaactgctccgctttgtggaacagtcccgtttcgaccgtctgggggtcttctgctat
tccaaggaagaaggaacgccggcggcggagatgccggaccaagtgtcggagcgggtcaag
cgggagcggcaccgcaagctgatgaaagcccagggtagggtctccttccgcagcaaccgg
gcactggtggggacggtggaacaggtgatcgtggaaggctacagcgaagagaccgagctg
ctgctgaagggacgtaccagccgccaggcaccggatatcgacggtcaggtctacatcacc
gccggccaggccaacgtgggggatatcgtcccctgccgcatcaccgactcctccgattac
gatctggtggcggagatgatggagccgtaa
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