Trichlorobacter ammonificans: GEAMG1_1778
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Entry
GEAMG1_1778 CDS
T09459
Symbol
ispA
Name
(GenBank) geranyl diphosphate/farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00900
Terpenoid backbone biosynthesis
tamm01100
Metabolic pathways
tamm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GEAMG1_1778 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tamm01006
]
GEAMG1_1778 (ispA)
Enzymes [BR:
tamm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GEAMG1_1778 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GEAMG1_1778 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
GEAMG1_1778 (ispA)
Prenyltransferases [BR:
tamm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GEAMG1_1778 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
CAH2031610
LinkDB
All DBs
Position
GEAMG1:1906363..1907256
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AA seq
297 aa
AA seq
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MDFTAYLKERIALVDQALDQYLPAEEKRPQSIHTAMRYSIFAGGKRVRPVLMLAACETVG
GKLEAALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTE
AFKLLSDPRINGDIPAATRLAVISEIATCAGTFGMVGGQVVDMESEGKPEMDLPTVQYIH
THKTGALIKAAVVAGALLGGADEQGLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDA
GSDEARGKATYPAVMGLAAAKQEAQAMMDDAFAALVPFGGAADPLRNIARYIVERKN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatttcacggcatacctgaaagaacgtatcgccctggttgaccaggcactggatcag
tatcttcccgctgaggagaaacgtccgcagagcattcacacagcaatgcgctactccatc
tttgccggcggcaagcgggtgcgccccgtcctgatgctggccgcctgcgaaaccgtggga
gggaagctcgaggcggccctgcccgcggcctgtgccatggaaatgatccacacctactcc
ctgatccacgacgacctgccggccatggacgacgacgacttccgccgcggccgtcccacc
aaccacaaggtgttcggcgaggcgatcgccatcctggccggtgacggcctgctgaccgag
gcgttcaagctgctcagcgatccccggataaacggggatatcccggcagcaacccgcttg
gcggtgatcagcgagatcgccacctgcgccggcaccttcggcatggtggggggccaggtg
gttgatatggaaagtgagggaaagccggagatggatctgcccacggtgcagtacatccac
acccacaagaccggcgcgctgatcaaggctgccgtcgtggccggcgcactgctgggcggt
gccgacgagcagggactggcggcgatccgtcgctacggcgaggcagccggcctggccttc
cagatcgccgacgacatcctggatatcgagggaaccaccgaagaaatcggcaaggatgcc
ggctcggacgaggcccggggcaaggccacctacccggcggtgatggggctggctgcggcc
aagcaggaggcccaggccatgatggacgacgcctttgccgccctggtccccttcggcggt
gccgccgacccgctgcggaacatcgcacgctacattgtggaacgaaagaactga
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