Tahibacter amnicola: N4264_07930
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Entry
N4264_07930 CDS
T09840
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tamn03009
]
N4264_07930 (rimO)
Enzymes [BR:
tamn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N4264_07930 (rimO)
Ribosome biogenesis [BR:
tamn03009
]
Prokaryotic type
ribosomal protein modification factors
N4264_07930 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF5666
Motif
Other DBs
NCBI-ProteinID:
UXI69561
LinkDB
All DBs
Position
1900069..1901388
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AA seq
439 aa
AA seq
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MSRQNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDNADVVVVNTCGFIDAAVEE
SLDAIGEAMAENGKVIVTGCLGAKADVIREAHPDVLSISGPQDYTSVMNAVHAQVPPKHD
PFLDLVPPQGLKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLRSRPVDEVLVEAEKLAK
GGVKELLVISQDTSAYGVDLKYAERQWRGKAYRTRMTELCDGLAELGIWTRLHYVYPYPH
VDEVVPLMAQGRLLPYLDIPFQHASPRILKLMKRPGAVDKVLARVRNWREICPDLTIRST
FIVGFPGETEAEFEELLDFLREAQLDRVGAFAYSPVDGAAANDLPDPVPDDIKEERLERF
MEVQAEISGIRLGEKIGRRITVLVDHADGEGAVARSSADAPEIDGVVHIEDGQKLKPGQF
VEVEVINADNHDLFARVAV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccagaatcccaaggtcggctttgtcagcctcggctgccccaaggcactggtc
gattccgaacgtattctcacgcagctgcgggtcgaggggtacgacatcgtgcagacctac
gacaacgcggacgtggtcgtggtcaacacctgcggattcattgacgccgcggtcgaggaa
tcgctcgacgccattggcgaggccatggccgagaacggcaaggtgatcgtgaccggctgc
ctgggcgccaaggccgatgtgatccgcgaggcgcatccggacgtgctgtcgatttccggc
ccgcaggactacaccagcgtcatgaacgccgtgcacgcccaggtgccgcccaagcatgat
cccttcctggacctggtcccgccgcaggggctcaagctcacgcccaagcactacgcctat
ctgaaaatctccgaaggctgcaatcaccgctgttcgttctgcatcatcccctcgatgcgt
ggcgacctgcgttcgcgcccggtcgatgaagtgctggtggaggcggagaagctcgccaag
ggcggcgtgaaggagctgctggtcatctcgcaggacaccagcgcctacggcgtggatctg
aagtacgccgagcgccagtggcgcggcaaggcctaccgtacccgcatgaccgaactgtgc
gacggtcttgcggaattgggtatctggacacgtctccactatgtatacccgtaccctcac
gtggacgaagtcgtcccgctgatggcgcaggggcgcctgctgccgtacctggacatcccg
ttccagcacgccagcccgcgtatcctgaagctgatgaagcggcctggagcagtggacaaa
gtgctggcccgggtgcgcaactggcgcgagatttgtccggatctgaccatccgctccacg
tttatcgtcggctttccgggagagaccgaggccgaattcgaggaactgctcgacttcctg
cgcgaagcgcagctcgaccgcgtcggtgccttcgcctactcgccggttgatggcgctgcg
gccaacgacctgcccgatccggtgccggacgatatcaaggaagaacgcctggaacgcttc
atggaagttcaggccgagatcagcggcatccgcctgggcgagaagatcggtcgccgcatc
acggtgctggtcgaccatgccgacggcgagggtgcagtggcgcgatcgtctgccgacgcg
ccggaaatcgacggcgttgtacacattgaggacggccagaaactcaagcccgggcagttc
gtcgaggtcgaggtgatcaacgccgacaaccacgacctgttcgcgcgcgtggcggtctga
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