Candidatus Thiothrix anitrata: J8380_10160
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Entry
J8380_10160 CDS
T07878
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
tani
Candidatus Thiothrix anitrata
Pathway
tani00020
Citrate cycle (TCA cycle)
tani00640
Propanoate metabolism
tani00660
C5-Branched dibasic acid metabolism
tani01100
Metabolic pathways
tani01110
Biosynthesis of secondary metabolites
tani01120
Microbial metabolism in diverse environments
tani01200
Carbon metabolism
Module
tani_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
tani00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J8380_10160 (sucD)
00640 Propanoate metabolism
J8380_10160 (sucD)
00660 C5-Branched dibasic acid metabolism
J8380_10160 (sucD)
Enzymes [BR:
tani01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
J8380_10160 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QTR48664
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All DBs
Position
1945994..1946869
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AA seq
291 aa
AA seq
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MSVLINKDTKVICQGFTGKQGTFHSEQAIAYGTNMVGGITPGKGGTTHLGLPVFNTVREA
VEATGADASVIYVPAAFCKDSIIEAAYAGIKLIVCITEGIPALDMLDAKVVVDSLGVRLI
GPNCPGIITPGECKIGIMPGHIHKPGSVGIVSRSGTLTYEAVKQTNEWGQSTCIGIGGDP
IPGTSFIDALTLFQADPQTEVILMCGEIGGSAEEEAAEFIKANVTKPVVSYIAGVTAPKG
KRMGHAGAIIAGGKGTAQEKYAALQQAGVYTVQSPAELGKGVAAAFAALQG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattaatcaacaaagacaccaaagtcatctgccaaggtttcaccggcaagcaa
gggactttccattccgagcaagcgattgcttacggcactaacatggtcggcgggattaca
ccgggcaaaggcggcacaacgcatttgggtttgccggtgttcaataccgtgcgtgaagcg
gtggaagcgacaggtgcggatgccagcgtgatctacgttccggcggcattctgcaaagat
tcgattattgaagcagcctacgcgggtatcaagctgattgtgtgcattaccgaaggcatt
ccggcactcgatatgctggatgcgaaagtggtggtggatagccttggcgtgcgcctgatt
ggccccaactgccccggtatcattacaccgggcgaatgcaaaatcggcattatgccgggt
cacatccacaagccgggcagtgtcggtatcgtgtcacgttctggcacgctgacttacgaa
gcggtcaagcaaaccaacgaatgggggcaaagtacctgtatcggtattggtggcgacccg
attccgggcacaagcttcattgatgcactgaccttgttccaagctgacccgcaaaccgaa
gtcattttaatgtgtggcgaaatcggcggttcagcggaagaagaagcggcggaattcatt
aaagccaacgtaaccaagccagtggtttcctacattgcaggcgttactgcacccaagggt
aagcgcatgggtcatgctggtgcgattattgcaggcgggaagggtacggcgcaggaaaag
tatgctgcactgcaacaggcgggcgtgtatactgttcagtctccggctgaactagggaag
ggtgtcgctgctgcgttcgcagccctgcaaggataa
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