Tabrizicola piscis: EI545_15330
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Entry
EI545_15330 CDS
T05742
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
taw
Tabrizicola piscis
Brite
KEGG Orthology (KO) [BR:
taw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
taw03009
]
EI545_15330 (rimO)
Enzymes [BR:
taw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EI545_15330 (rimO)
Ribosome biogenesis [BR:
taw03009
]
Prokaryotic type
ribosomal protein modification factors
EI545_15330 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZL60081
UniProt:
A0A3S8U8Y4
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All DBs
Position
complement(3154977..3156371)
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AA seq
464 aa
AA seq
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MSENPPLLRPDLARALVPDTRRARSDGSRQPTIGMVSLGCPKALVDSERILTRLRAEGYA
ISPDYKGADAVIVNTCGFLDSAKAESLEAIGEALQENGRVIVTGCLGAEPEYITGAHPKV
LAVTGPHQYEAVLDAVHSAVPPAPDPFIDLLPATGVSLTPRHYSYLKISEGCNHACKFCI
IPDMRGKLVSRPAHAILREAEKLVEAGVKELLVISQDTSAYGVDRKHDLSPWKGAEVRAH
ITDLAREMGKLGAWVRLHYVYPYPHVRQLIPLMAEGLVLPYLDIPFQHAHPDVLRRMARP
AAAAKTLDEIAAWRAIAPDLTLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYEN
VAGARSNALPDHVDADVKQDRFDRFMEKAQAISEAKLAAKVGKVLEVIVDEVDEDGATCR
TKADAPEIDGNLFIDEGFETLKPGDIVKVTVDEAGEYDLWGRLH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacccgcccctccttcgccctgaccttgcccgcgcccttgtccccgacacg
cggcgcgcccgatcggacggttcgcgccaacccaccatcggcatggtcagccttggctgc
cccaaggcgctggtcgatagcgaacgcatcctgacgcggctgcgcgccgagggctatgcc
atcagccccgactacaagggcgccgatgcggtgatcgtgaacacctgcggcttccttgac
agcgccaaggccgagagccttgaggcgattggcgaagccttgcaggaaaacggccgggtg
atcgtcacgggctgccttggggcggaacccgaatacatcaccggcgcgcatcccaaggtg
ctggccgtcaccggcccgcatcagtacgaggcggtgctggatgccgtccacagcgccgtg
ccgcccgcgccagacccgttcatcgaccttctgcccgcaaccggggtttccctgacaccg
cgccactacagctatctgaagatttccgaaggctgcaaccacgcctgcaagttctgcatc
atccccgacatgcgcgggaaactggtcagccgccccgcccatgccatcctgcgtgaggcg
gaaaagctggtcgaggcgggggtgaaagagcttctggtcatctcacaggacaccagcgcc
tatggggtggaccgcaagcacgacctctccccctggaagggggccgaggtgcgcgcccat
atcaccgacctcgcgcgcgaaatgggcaagctgggggcctgggtacggctgcactacgtc
tacccctacccccacgtgcggcagctgatcccgctgatggccgaaggtctggtgctgccc
tacctcgacatcccgttccagcacgcccacccggatgtcctgcgccgcatggcccgccca
gcggcggcggccaagacgctggacgaaatcgccgcctggcgcgcgattgcccccgacctg
accctgcgctccaccttcatcgtcggctaccccggcgagacggaggccgagttccagacc
ctgctggactggctggatgaggcgcaactggaccgggtcggttgcttccaatacgaaaac
gtcgccggagcgcggtcgaacgccctgccggaccatgtcgacgcggacgtgaagcaagac
cggttcgatcgcttcatggaaaaggcacaggccatttccgaggcgaaactggccgcgaaa
gttggaaaagtgctagaggtgatcgtggatgaggtcgacgaagacggcgccacctgccgc
accaaggccgacgcgccggaaatcgacggcaacctgttcatcgacgaaggctttgaaacg
ctgaagcccggcgacatcgtcaaggtgacggtggatgaggcgggggaatatgacctttgg
ggtcggctccactga
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