Thermococcus barophilus: TERMP_00242
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Entry
TERMP_00242 CDS
T01377
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tba
Thermococcus barophilus
Pathway
tba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TERMP_00242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tba03021
]
TERMP_00242
Enzymes [BR:
tba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TERMP_00242
Transcription machinery [BR:
tba03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TERMP_00242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
ART
Motif
Other DBs
NCBI-ProteinID:
ADT83219
UniProt:
F0LI65
LinkDB
All DBs
Position
199456..202176
Genome browser
AA seq
906 aa
AA seq
DB search
MQSIKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVIDPGLRC
ETCGARYGDCPGHFGHIELARPVIHVGFAKTIYRILESTCRECGRIKLTDEEIEEYMKKF
ELIGDRKKTKDKLIKEIHKKAKERMVCPHCGAPQFPLKFERPTIYWELRRDEQGNEYKHR
MMPTEVRDRLEKIPDRDLPLLGLHPEKSRPEWMVLTVLPVPPVTVRPSITLESGIRAEDD
LTHKLVDIIRINNRLKTNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPAAKHKSGRP
LKTLAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMLSINEVGVPLAIAMELTVPEKVT
DFNIEKLRKMVLNGPEKYPGANYVIDPQGRRIRLMESNRETIAEMLDIGWTVERHLMDGD
IVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
ARILMEVQNHIISPRYGGPIIGGIQDHISGGYLLTREGAYFTRSEVEQMLMFAGVDIDKL
PEPDKVEDGIEYWSGKTIFSLLLPDDLTIWYRNKLCDDPSKCEPLEKLIEEKLLPDPEEV
RKLAYDGFVYIQNGKLLSGAIDKKAYGREDGKILDIIVREYGVERARQFLDQVTKLAIWV
ITHKGFTTAIDDEDLPEEAMDRIKEIIREAEERVKRLIEAYKAGELEPLPGKTLEETLES
KIMAVLAEARDNAGKVAEQYLGMNNFAVIMAKTGARGKILNITQMAALLGQQSIRGKRLY
RGYRGRVLSHFKPGDLGARARGFVINSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIIVQFRYGEDGVDPMKSWQGKTVDIDRIIVRSLIK
LRANSK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaattaaaaaggttatcggttcaattgagtttggtatcctttcccctcaagag
attagaaagatgagcgctgccgaaattacagttccagacacttacgatgacgatggctat
ccaatagaaggaggactgatggacaagcgcttgggcgttattgatccgggtctgagatgt
gaaacctgtggtgcaagatacggtgattgccctggccactttggacacattgagctcgct
cgtccagtaattcacgttggatttgccaagacaatctaccgcatcctggaaagcacttgt
agggaatgtggcaggataaagctcaccgacgaagaaattgaggagtacatgaagaagttt
gagctgatcggtgataggaagaaaacaaaagacaagctcatcaaagagattcacaagaag
gcaaaggaaagaatggtctgtccccactgtggtgctccacagttcccactgaagtttgag
aggccaacgatttattgggaactcagaagggatgagcagggtaacgagtacaagcacaga
atgatgcccactgaagtcagagatagacttgagaagattcccgacagggatttgcctctt
cttggtcttcatcctgaaaaatctcgtccggaatggatggttctcacggttctgcccgtt
cctcctgtcactgtaagaccatccatcaccttagagagcggtataagagctgaggatgat
ttgactcacaagctggttgatatcattagaatcaacaacagacttaagactaacattgaa
gctggtgcacctcagctgattattgaggacctctgggatctcctccagtaccacgttacc
acctacatcaacaacgaaacctcgggcgttcctgctgcgaagcacaagagcggacgtcca
ttaaaaaccttagcgcagagattgaaaggcaaggaaggaagattcagaggaaacctcagc
ggtaagcgtgtcaacttttcagcaagaaccgttatttctccagatccaatgctcagcatc
aatgaagttggtgttcccttggcaattgctatggagctgacagttcctgaaaaggttaca
gacttcaacattgagaagctcagaaaaatggttttgaatggtccagaaaagtatccggga
gcgaactatgtaattgatccgcagggaagaaggattagactcatggagagcaacagagaa
acaattgcagagatgctcgacataggttggacggtggagaggcacttaatggatggggat
attgtcctctttaacagacagccttctctgcacagaatgagtatcatggctcaccgcgtt
agggtaatgccttacaaaaccttccgcctcaacttggcagtatgtccgccttacaacgct
gattttgatggagacgaaatgaacctccacgttccacagacagaggaagcacaagctgaa
gcaaggattttaatggaagtgcagaaccacataatttcaccaagatatggaggaccaatc
atcggtggaattcaggatcacatctcgggtggatatctgcttacaagggagggagcatac
ttcacaaggagcgaagttgagcagatgctcatgtttgctggtgttgacattgacaagctt
ccagagccggataaagttgaggatggtattgaatactggagcggaaagacaatattctcc
ctcctccttccagatgacctaacaatatggtacagaaataagctctgtgacgacccaagc
aagtgcgagccgcttgaaaagctcattgaagaaaagctccttccggatccagaagaagtt
aggaaactggcatatgatggattcgtttacattcaaaacggtaaattgttaagcggtgca
attgacaaaaaggcttacggtagagaggatggcaagatccttgacataatagttagagag
tacggcgttgagagggcgagacagttccttgatcaggttacaaagctcgcaatctgggtg
ataacgcacaagggcttcacaacggcaattgatgatgaggacttgcctgaggaagcaatg
gacaggattaaggagattatcagggaagctgaggagagagtaaagagactcattgaggct
tacaaagctggagagcttgagccactgcccggtaagactcttgaggaaacactggagagc
aaaatcatggcagtcttggctgaggcgagagacaacgccggtaaagtcgccgaacagtac
cttggtatgaacaacttcgcagttatcatggcaaaaaccggtgcaagaggtaagatactc
aacatcacgcagatggcagctttactcggtcaacagtcaatcagaggtaagcgtttgtac
aggggttatagaggaagagtgctaagtcactttaagcctggcgacttaggtgcgagagcg
aggggatttgttatcaattcatacaagagcggactgacaccacaggaatatttcttccat
gcaatgggtggtagagaagggctggttgatacagcagtcagaacagcccagagcggttac
atgcagcgtagattgatcaatgctctgcaggaccttaaagtcgactacgacggaacggtt
agagacccaactggaataatcgtccagttccgctatggtgaggatggtgttgacccaatg
aagagctggcaagggaaaactgttgatatcgacagaattattgtgaggtctctgattaaa
ttgagggcaaacagcaagtga
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