Trematomus bernacchii (emerald rockcod): 117469538
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Entry
117469538 CDS
T09643
Symbol
hlcs
Name
(RefSeq) LOW QUALITY PROTEIN: biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00780
Biotin metabolism
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117469538 (hlcs)
Enzymes [BR:
tben01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117469538 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117469538 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117469538 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117469538 (hlcs)
BRITE hierarchy
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
117469538
NCBI-ProteinID:
XP_033969860
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MLITLCYVYLWVRFNKCYSVLIRNSLCRLNSSSFSFSFRLCSSPASAASPTGAHTAAPRP
PSPPPPEDNVFLQLGDRAVYVTEPQACDDLSKWTVLLGSSLVCGPRIENISFIIEATGHR
VGYHSPHTSNQKVLKWSDYCRPLACSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDNGL
KPSKIIPVLLQESTLSELLEKQCPKTETFTHTGGGAAERRPPSDHQLLQCPKGSLLLTPE
VKRRLEERRGSEPLRGSKDLGVVCDQEDRSLGNYLHMEGHKHHLHLSSCHECLELENSTI
LSVKYASAENIPDLPDDDSGGLGSGDETLDDVEPDGGFSGLSDCKSKPPNLLLYTGGCQK
RYEAVRQLISECIDMENNIIYPLQPQQALSDPWLENTRLLVLAEEETLTPQLQTRFLTYL
SQGGRVLGLASTLCPAGLCLEARERRRGQVSRLSFTREDSTELQLSVLASGKVYIRDTQG
GGEVELWGELKGDSPHQRDMVVVRVTHGGDGGEAVLCQAHLEIAPDSQNLQPEGFDELKV
SNALRYEVLTEILTSLGLSCELSQTPPPSPVHLLATSQEAKASFVNWLQTRADQKGLLKS
SNASLKMVSCSELQDAPSLPDGSLALVTNSSEAQSWPQFSMETYSKNLKSSVLGHTLLYT
EVATSTMDLLQGLTLHLPKDVGLIAIAGRQIQGRGRGRNAWLSPPGCAMFTLSLQVEMSS
RLGQRIPFLQHLVALAVVEAVRSLPGYQDLDLRVKWPNDIYYGNLMKLGGVLVTSTVIGS
TFHLLIGCGFNVTNSNPTVCINDLIQQHNTQQGCSLPPLCCAQIIARSVSFLEALICSFQ
QGGPDAVLPTYYKRWLHSGTRVRLWSEDGVEAEVVGLDHNGFLQVHNKEQGVVSVEPDGN
SFDMLKNLVVIKQR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacgctgtgctacgtctatctgtgggtgcgctttaacaagtgctactcggtg
ctcatccgcaacagcctgtgcagactgaacagcagcagcttcagcttcagcttcagactg
tgctccagcccggcctcagcagcttctccgaccggagcacacacagccgcaccacggccg
cccagcccgcctcctcccgaggacaacgtcttcctccagctgggggacagggccgtctat
gtcacggagcctcaggcatgtgatgacctcagcaaatggaccgtgctgttgggttcctct
ctggtttgtggtccacgcatagagaatatttcattcatcatagaggcgacaggacacaga
gtgggctaccattctcctcacacatccaatcagaaagtgctgaagtggtctgactactgc
cgccctctggcctgcagccctgggcagcccttcagagcggtggcccaggccagcgtggat
aacttcagtcgtctgggagtggctttcattgaagaccgccttcagctggacaatgggctt
aagccttcgaagataatccctgtcctcctccaagaatccactctcagtgaactgttggag
aagcagtgtccaaagactgagactttcacccacactggagggggtgctgctgagcgtcgt
cccccgtcagaccaccagctcctccagtgccctaaaggcagcctgctcctcaccccggag
gtgaagaggaggctggaggagcgccgagggtcggagccgctcagagggagcaaggacctg
ggagtcgtctgtgaccaggaggaccgctccctggggaattatctccacatggagggccac
aaacaccacctccatctgtccagctgccacgagtgtttggagctggagaacagcaccatc
ctctctgtcaaatacgcctcagctgagaacattccagaccttcctgatgatgactcaggc
gggctcgggagtggagatgagactttggatgatgtggagcccgatggagggttttctggg
ctgagtgactgtaaaagcaaacctccaaatctcctgctgtacacggggggttgccaaaag
cgttatgaagccgtgcgccagctgatatcagagtgtatagacatggaaaacaacataata
tatcccctccaaccgcagcaggctctgagcgacccctggctggagaacaccaggctcctg
gtcctggccgaggaggaaactctcaccccccagcttcagacccgttttctcacctacctg
agccaggggggcagggtgttgggtctggcctccaccctgtgccctgcaggcctgtgtctg
gaggcccgggagaggcggcgagggcaggtgagccggctgagcttcacccgggaggacagc
acggagctgcagctcagcgtgctggccagcgggaaggtctacatcagggacactcaggga
gggggtgaggtggagctgtggggggagctgaaaggagacagcccccatcagagggatatg
gttgttgtcagggtaacccacggaggagatggtggagaagctgtcctctgtcaggcacat
ctggaaattgctcctgactcccagaatttacaacccgaaggttttgatgagctgaaggtc
agcaatgctctgcgttatgaagtcctgacagagatcctcacctctctgggcctcagctgt
gagctcagccagaccccccccccaagcccagtccacctgctggccacctctcaggaggcc
aaggccagctttgtgaattggctgcagacacgtgcagaccagaagggtctccttaaatca
tccaatgcctccctaaagatggtgtcctgctctgagctccaggatgctccttcgctgcct
gatggctctctggccctggtcaccaactcttcagaggcccagagctggcctcagttcagt
atggagacctacagtaagaacctgaagagcagcgtgctgggacacaccctgctgtacacc
gaggtcgccacgtccaccatggacctgctacaaggtctgactctgcacttaccaaaggac
gtgggtttgatagcgatagctggtcgacagatccagggcagaggtcgggggcggaacgcc
tggctcagccccccggggtgcgccatgttcaccctgtccctgcaggtggagatgagctcc
aggctggggcagaggatccccttcctgcagcatctggtggctctggcggtggtggaggct
gttcgctcacttcctggataccaggatttagacctgagggtgaagtggcccaatgacatc
tactacggtaacctgatgaagctcgggggggttctggtgacttccacagtaataggatca
acgtttcatctgctcataggctgtgggttcaacgtgaccaacagtaaccccacagtgtgc
atcaacgacctgatccagcagcacaacacccagcagggctgcagcctgcccccgctctgc
tgcgctcagatcatcgcccgcagcgtcagcttcctggaggccctcatctgcagcttccaa
caggggggccccgacgccgtcctgcccacctactacaagagatggctgcatagcgggacc
cgggtgcggctctggagcgaggacggggtggaggcggaggtggtcggcctggaccacaac
ggcttcctgcaggtgcacaacaaggagcagggcgtggtgtcagtggagcccgatgggaac
tccttcgacatgctgaagaacctggtggtcatcaagcagcgttag
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