Trematomus bernacchii (emerald rockcod): 117472941
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Entry
117472941 CDS
T09643
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben00310
Lysine degradation
tben01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117472941 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tben03036
]
117472941 (smyd1b)
Enzymes [BR:
tben01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117472941 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
117472941 (smyd1b)
Chromosome and associated proteins [BR:
tben03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117472941 (smyd1b)
BRITE hierarchy
Motif
Pfam:
SET
zf-MYND
Motif
Other DBs
NCBI-GeneID:
117472941
NCBI-ProteinID:
XP_033974288
EnsemblRapid:
ENSTBNG00005024210
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MENVAIFESPGKGRGLKATKEFWAGDVIFAEPSVAAVVFDSLADRICHSCFRRQEKLQKC
GQCKFAHYCDRTCQRAGWAEHKLECSAIKTHGKAPNENIRLGARILWRLDKDGSMMSDTQ
MVTLEELEDHIADMPEDDLKDFKVDIHNFLDYWPRSSKQHSIDDTFHIFGVINCNGFTVS
DQRGLQAVGVGLFPNLCMVNHNCWPNCTVILNHGNQSAVNTMFHSQRRIELRSLSKIEGG
DELTVSYVDFLNMTEERQRLLKTQYFFDCTCEHCKDHVKDDLKMGGLEVDGVKPTEEQVK
EATDYCFEMMDKMEKARLNGNYHEVVKISKDCLEKTEPVLADTHIYQLRMWSTLSEVQAY
LQLFDDAADNSRKMVEGYMKLYHPNNAALGMAAMRSGVTHWQAGEIEIGHGMVCRAYAIL
MVTHGPMHPITKDLEAMRMQTEMELRMFKQNQYVYHSMREAALKNKPMTMMHEPRNMEEG
IKNLYHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggcaatattcgagtcacctggaaaggggaggggtcttaaggccactaag
gagttttgggctggagacgtcatttttgcagagcccagtgttgcagctgttgtgtttgac
agcctagcagaccgtatttgccacagctgcttccgaagacaagaaaagctacagaagtgc
ggccagtgcaaatttgctcattattgtgaccgaacctgccagcgagccggctgggccgaa
cacaagctagaatgtagtgccataaaaacgcatggcaaagcaccgaacgagaacatccgt
ttgggggctcgcatcctgtggcgccttgacaaagatgggagcatgatgtcggacacgcag
atggtaacactggaggagctggaggatcacattgctgacatgcctgaggacgatttgaag
gacttcaaagtggacatccacaacttcctggattactggccccgcagcagcaagcagcac
agcattgatgacacttttcatatttttggagtgattaactgtaatggtttcactgtgagt
gaccagaggggcctccaggcagtgggagtgggcctcttcccaaatctttgcatggtgaat
cacaactgctggccgaactgcaccgtgatcctcaaccacggcaatcaatcggcagtgaat
actatgtttcattctcaacggaggattgagctgcgttctctgagtaagattgaaggggga
gacgagctcacagtttcatacgtggacttcctgaatatgaccgaggagagacagaggctg
ctgaaaacacaatacttctttgactgcacatgtgagcactgcaaggaccacgtcaaagat
gacttgaagatggggggattggaagtggatggagtcaagcctacagaggaacaagtgaaa
gaggctacagattattgctttgaaatgatggataaaatggaaaaggctcgactaaatggc
aactaccatgaggtggtaaagatcagcaaggattgcctggagaagacagaaccagttttg
gctgacactcacatttaccagctgcggatgtggagcacgttaagtgaggtgcaagcttac
ctgcagttatttgatgatgctgcagacaattcccgcaaaatggtggagggatacatgaaa
ctgtaccacccaaacaatgctgctcttggtatggccgccatgcgatcaggagtgactcac
tggcaagctggggaaatagagatcggccatggcatggtctgcagggcctacgccattctc
atggtcacccacggcccaatgcatcccatcaccaaggacctggaggcaatgcgtatgcag
acagagatggagctgaggatgttcaagcagaaccagtatgtctaccacagtatgagagag
gcagcactgaagaacaaaccgatgaccatgatgcatgaacccaggaatatggaggaggga
atcaagaacctctaccaccggaggaagtga
DBGET
integrated database retrieval system
