Trematomus bernacchii (emerald rockcod): 117474233
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Entry
117474233 CDS
T09643
Name
(RefSeq) transcription factor E3-like
KO
K09105
transcription factor E3
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117474233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tben03000
]
117474233
Transcription factors [BR:
tben03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117474233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
117474233
NCBI-ProteinID:
XP_033976086
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSSEPEQLGTGLLQTQTVFVILDSAETINLVRVESGIVADIEVDNLLPSDCDTFYQIKSQ
PISFSTSLAASSPMSSSLPSAMTSRVLMRQDLMRQQALEEEQKEAQQQLLRSADSSSPIS
VSLSSSSGPPAQVPVEVLKVQTHLENPTRYHIQQAQRQQVRQYLSTAKTANQEPAGLPPS
PFPHKLQPANKNEMEATVIDDIISLESSLNDEFLTMMDSGLQIATTLPVSGNMLDLYGGM
ATPTITVSNSCPADLHGIKREVNEVETKAFIKERQKKDNHNQIERRRRFNINDRIKELGG
LIPKSSDPESRWNKGTILKASVDYIRKLQKEQHRAREMEERQRRLENTNHSLLLRIQELE
LQAGLNSSSSSSSLDPQTLLSPTLPQPFSSSSSSSLVTPSLGLDALSFVDLDDPHGVSGV
FSPDLMSDVGLTELHGLLMEEGGGGVMSDPLLSCGASISSSRRSSFSMEEDL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgaaccggagcagctggggaccgggctcctgcagacgcagaccgtgtttgtg
atcctggattcggctgaaacaatcaacctggtccgggtggagtctggtattgtcgctgac
atcgaggtggacaatttgctgccgtcagactgcgacaccttctaccagatcaagagtcag
ccaatcagcttcagtacatcattagcagcttcctcaccgatgtcatcctcgctgccgtca
gccatgacgtccagggtgttgatgcgtcaggatctgatgcgtcagcaggctctggaggag
gagcagaaggaggctcagcagcagctcctccgatccgctgactcctcctcccccatctct
gtgtctctctcctcctcctctggacctcctgctcaggtccctgtggaggtgctcaaggtg
cagactcacctggagaaccccaccaggtaccacatccagcaggcccagaggcagcaggtg
cgtcagtacctgtccaccgccaagacagccaatcaggagccagctggacttccaccaagc
cccttcccccacaaactgcagcctgcaaacaaaaatgagatggaagcgacggtcatcgat
gacatcatcagcctggaatcgagtctgaacgacgagtttctgacgatgatggactcgggt
ctgcagatcgccaccacgctgccggtgtctgggaacatgctggacctgtacggaggcatg
gccacgcccaccatcaccgttagcaacagctgcccagccgacctgcacggcatcaagagg
gaggtgaacgaggtggagaccaaagctttcatcaaagagagacagaagaaagacaaccac
aaccaaatcgagaggagaaggaggttcaacatcaacgatcggatcaaagaactcgggggt
ctcatccctaaatccagcgacccggagtcgaggtggaacaaaggcaccatcctgaaggcg
tcggtggattacatccggaaacttcagaaggagcagcacagagcccgagagatggaggag
agacagaggaggctggagaacaccaaccactctctgctgctgcgcatccaggagttggag
ctccaggcgggtctcaactcttcctcctcctcttcctctctggaccctcagaccctgctc
tcccccacgctgcctcagcccttctcctcttcctcctcttcctccctggtgaccccctcc
ctcggtctggatgccctcagcttcgtggacctggacgatcctcacggagtctccggtgtc
ttctccccggacctgatgtccgacgtggggctgacggagctgcacggcctgctgatggag
gaggggggcgggggggtgatgtccgaccccctgctgtcctgcggagcgtcgataagcagc
agcaggaggagcagcttcagcatggaggaagatctctga
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