Trematomus bernacchii (emerald rockcod): 117474934
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Entry
117474934 CDS
T09643
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117474934
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117474934
BRITE hierarchy
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117474934
NCBI-ProteinID:
XP_033976861
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MLSRGQSLFKMWILKKDVVQREEKRLSPPQLKQLMEGGVRARLKGTRMASLLPPAGSETF
RRLKPASRERVQDRQTSEVVQLEAGKPLPFFFGYPPPEFLNIPLEEMDPYYQSQKTFVVL
SRGNVLHRFHGGPALSLLSASNPLRRAAIVLTLTHSLFSWFILLTILSSCVFMTLSEPPE
WSSTVERVFMAIFTFEAVVKVVARGLCAGRFTFLRGGWNWLDVLVICTGYLTQVVNVRIF
TVLGSVARVLKIIPVIPGLKKTVGDLVQSVKRLGGVIALMLFFFGFCALIGQHFFMGSLK
HKCVVWRPESSNNQSSQYNYSQYNYAKYINDHANLYYLPDQRDALLCGNASNAGVCPPGY
SCIRTGRNPDYGYTSFDSFGWSLLSVVRLVSKDFWENLMLQVLRSSGKPYLTFFLLVVFP
AGFFVLSLIVAAVALVAGEQQGAAVSESKQREEEFSQILEAIKRSEEEEAASRVALSQEP
EGKKKDSMEGLEEVQRSCPACCSVTSKVFLKWNCCGCWRGLKQRLQALVRDPLFDLGVVL
CLVINAIFMSLEHFPMTEQFSSMLNDVQLVFTAIFIVEMLLKLVAFDPYGYFQVSWNIYD
SIIVFVSLLLLTDIINLRFLLLMRFLRLARWWPMLHMLMKIIWTALSSLRNLTLLLFITL
FIFSVAGMQLFGKDYKDQVCRIAEDCELPRFHMTDFFHSLLVVLRVLFGDWVEALWDCME
VSGKTSCLLFFMMLLVSGNLLALNLFLVLLLSPLRGLSPAYPEEKVNNNVQMALRRIYRA
AGSLLGRKTGAKPELTERDGQEVDRKEHLALDIRTNGDHEVPEETPEQKAKTPEGHQHGD
PEDCCSQKCCPLQVVDSSRGAGRVWTNFRRFCLCIVQHKLFEIFIIFIIVLSSVALAFED
VHLHQWPLLKEVLHRADQLFTLLFLSEMLLKWSAFGLSKYFRDGWCCLDFLVLHLFLVSL
GVEIFGIGSVGFFLFLRSLRALGPLRILSHFQGLRVVVLSLLGGGAGPAAGSAGGSAGSA
GFQHVGREPVCGEVLLLF
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcagaggacagtctttatttaagatgtggatcctgaagaaggacgttgtgcag
agagaagagaagaggctgtctcctccacagctgaagcagctgatggagggtggggtccga
gcccgactgaagggaacccgcatggcgtctctgctgcctcctgctggatctgagaccttc
agacgcctcaaaccggcctccagagagcgggtccaggaccggcagacctcagaggtcgtt
cagctggaggctgggaagcccctccccttcttcttcggatacccgcccccagagtttctg
aacatcccattggaggagatggatccctactaccaatcgcagaagaccttcgtggtcctc
agcagaggaaatgtcctccacaggtttcatggcggtccggctctctccctgctgagtgcc
tccaaccctctgaggagagccgccatcgtcctgaccctcacccactctttattcagttgg
ttcatcctcctgacgatcctgagcagctgtgtgttcatgacgctgagcgaacctccagag
tggagcagcactgtggaacgcgtgttcatggccatcttcacgtttgaagcggtggttaaa
gtcgtggcccgaggactctgtgctggacgcttcaccttcctcagaggcggctggaactgg
ctggacgtgctggtcatctgcaccggatatctgacacaggttgtaaatgtgaggatattt
actgtactgggttcagtcgctcgtgtactaaagatcatcccagtcatcccaggtctcaag
aagactgttggagatctcgtccaatcagtgaagagactcggtggtgtcatcgctctgatg
ctttttttctttggcttctgcgctctgattggtcagcatttcttcatgggaagcctgaag
cataagtgtgtggtctggcggccagagtcctcaaacaaccagagctcccagtacaactac
agccagtataactacgccaagtacatcaacgaccacgcaaacctatactacctgcccgat
caaagggacgctctgctgtgtggaaacgcctctaatgccggggtctgtcctccaggttac
agctgtatcaggacggggaggaaccctgactacggatacaccagcttcgactcgttcggc
tggtccttgctgtctgtggtccggctggtgagcaaggacttctgggaaaacctgatgctg
caggtgttgcgatcctcaggtaaaccctacctcactttcttcctgctcgtcgttttcccc
gccgggttctttgtcctcagcctcatcgtggcggcggttgccttggtagccggcgagcag
cagggggcggcggtcagcgaatcaaaacagagagaagaagagttcagtcagatcctggag
gcgataaagaggagcgaggaagaggaggctgccagcagggtggcgctctcacaggaacca
gaggggaagaagaaggacagcatggaagggttggaggaggtccagcgctcgtgtcctgct
tgctgctctgtcacctctaaagtcttcctgaagtggaactgctgtggctgctggcggggg
ctcaaacagcggctccaggccctggtgagggacccgctgttcgacctcggggtcgtgctc
tgcctcgtcatcaacgccatcttcatgtctctggaacatttccccatgacggagcagttt
agctccatgctgaatgacgtacagctggtcttcacggcgatctttatcgttgagatgctc
ctgaaactcgtggccttcgatccgtacggatatttccaggtatcctggaacatctatgac
agcatcatcgtcttcgtcagtctgctgctcctcaccgacatcatcaacctgcgcttcctc
ctattgatgcggttcctccggctggccaggtggtggccgatgctccacatgttgatgaag
atcatctggacggctctgagttctctgaggaacctgacgctcctcctcttcatcacgctc
ttcatcttctccgttgctggcatgcagctttttggaaaggactacaaagaccaagtctgt
cgcatcgcagaggactgcgagcttcctcgtttccacatgacagacttcttccactccctc
ctggtggtcctcagggttctgttcggggactgggtcgaggcgctgtgggactgcatggag
gtctccggaaagacatcctgtctcctcttcttcatgatgctcctcgtctcaggaaacctg
ctggccctgaacctgttcctggtcttgttgctgagtccgctccgtggtctcagtccggca
tatccagaagagaaggtcaataacaacgtccagatggctttgaggcggatctacagagct
gctgggagtctgctggggaggaagaccggcgctaaaccagaactcacagagagagacgga
caggaagtggacaggaaggaacacctggctctagacatcagaaccaacggagaccacgag
gtgcccgaggagacgcctgaacagaaagcaaaaactcctgaaggccatcagcacggagac
cctgaggactgctgcagccagaagtgctgtcccctccaggtcgtggactcgtcccgtgga
gcagggcgggtctggactaacttcaggaggttctgcctctgcatcgtccaacacaagctc
tttgagatcttcatcatcttcatcatcgtgctgagcagcgtggctctggcgttcgaggac
gtgcaccttcatcagtggccgctgttgaaggaggttcttcatcgagccgatcaactgttc
accctcctcttcctcagcgagatgctcctcaagtggagcgccttcggactgagcaagtac
ttcagagatggctggtgctgcctcgacttcctggtcctccacctgttcctggtgtctctc
ggggttgagatctttgggatcggttctgtcgggttcttcctgtttctgaggagcctccga
gctctggggcccctgaggatcctgtctcacttccagggcctgagggtggtggttctctct
ctgctgggggggggggccggccctgctgctggttctgctggtggttctgctggttctgca
ggttttcagcatgttgggcgtgaacctgtttgcggggaagttctccttctgttttaa
DBGET
integrated database retrieval system
