Trematomus bernacchii (emerald rockcod): 117481746
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Entry
117481746 CDS
T09643
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-X
KO
K05718
integrin alpha L
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04514
Cell adhesion molecules
tben04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117481746 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117481746 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tben04147
]
117481746 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
tben04515
]
117481746 (zmp:0000001082)
04090 CD molecules [BR:
tben04090
]
117481746 (zmp:0000001082)
Exosome [BR:
tben04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117481746 (zmp:0000001082)
Cell adhesion molecules [BR:
tben04515
]
Integrins
Integrin alpha subunits
117481746 (zmp:0000001082)
CD molecules [BR:
tben04090
]
Proteins
117481746 (zmp:0000001082)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
ITGAX-like_Ig_3
VWA_2
FG-GAP_3
DUF4434
Motif
Other DBs
NCBI-GeneID:
117481746
NCBI-ProteinID:
XP_033985517
EnsemblRapid:
ENSTBNG00005000885
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MITCLRKHQQHTADRGGRMHGRRRIFLTFMVAAATYVSLAFNIDMTKPVVYVGEQKDFFG
YKVLQYSSGTNKGIIATAPLQQNGSGAICKSLQNQTFRCTNPQDISLTNTSVKHLGLSLA
KDSKRSQFTVCSPSVVHECYENSYMNSVCFNITDNLQQTSSFTSAFQDCTKKTVDLVFLF
DGSGSMTEAEFNKNKDFIVDIINSLKNSSIKFAAVQFSFTNSKVFDFNDYQAGSYLDKLR
KELHMRKLTNTHSALTYVLNNILKNPKAGASPDATKVVVLITDGDPSDRDRGIIKRYDDQ
NIIRFVIGVKNADLEKFRAIASEPKDKNAFKIENYDGLKGVLENFQKKIFQMEGSKVSRA
GELTNEMSQSGFSAVFFNDTLILGSVGSNSWRGSLQDRRGEIETQIEDPHMLDDSYLGYS
ISVGKKNNAPIYFAGAPRFNHKGQVVLFRHEGKNWTASQRVNGEQIGSYFGAELCSVDTD
SDGNTDFLLVGAPQFYQPQEKREGQIYIYTLTDEMQLKGELTVTAPSMGRFGTTISSLAD
LNGDGLRDVAVGAPLEDNNSGVVYIYLGDRIRGIRSDYSQRIIGHKIDLRLRFFGQSIDG
DIDLGEDGLPDIVVGSQGIAVVLRSRPVFNVMASLYFQPKEINTDKIECLGNTDANLPMV
TLTACFEMVETTRSKAEELSSTLNISYSIDVDPTRTTMYRGFFSETDRKARNLTSTPELR
DKDTCFNHSIYMQKCVKDTLMPISIKLQFSQVDSVSASAVLNVDSKTQATVEVPFEKHCK
KNDTCVAQLEVDFNFTTATLLVAEDNFLNVSVKLSNSGDDSYYTSLTMHYPPGLSFSMMV
LTESTRPTLHSCNDLEGVLNKTICGVSRPVFRSRSSATFRASFRIINEYEWNDTIVMTIT
GKSENTNSNNTNTLTKDIPVQFEIKMAVTVKEDLISYLNFTTEDTGPKQIVTTYKIGNLG
FKDFPVNVSLFFPTKLDHNFEMTNYQVIVQQNKTQCSRKTDKESEYCSPDKPCKVILCDS
FILEKESPTEITLIGDVQFRDLKQHAANIAFLKRYTGDSAEVKFKSFIEVDYDNNRYVLS
SYKKVEKYDNDPTRKWMEVRVEFIIPPDELLIILTGCGLGLLLLIIITVIMFKLGCFKRK
TLEYYQDQEEEALQAAPLAPTNKTVSQSETDDKSDQLAEEKMFLDDGEASGSSPPTDTME
VLE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatgtctcaggaaacaccagcagcacacagcagacagagggggaaggatgcat
gggcgacgtcgcatcttcctcaccttcatggtggctgctgccacctatgtttctttggct
ttcaacattgacatgacaaaacctgttgtctatgttggggaacaaaaggatttctttgga
tataaagtacttcaatattcgtccggcacaaacaaagggataatcgctacagcaccgctg
cagcaaaacggatctggagcaatatgcaaatccctccaaaaccaaacttttaggtgcacc
aaccctcaagatatttctctaacaaacacatccgtcaaacaccttggcctctcgttagcg
aaagactccaaacgatcccaattcacagtctgcagtccaagtgtagtccatgagtgttat
gagaactcctatatgaacagcgtgtgcttcaacatcacagataatcttcagcaaacctcc
tctttcacatctgctttccaagactgcacaaaaaagacagtggatcttgtctttctgttt
gatggatccgggagtatgaccgaagcagaattcaacaaaaataaagatttcatagtggat
ataataaacagccttaagaactcatcgatcaagtttgcggcggttcagttctcctttact
aacagcaaagtttttgacttcaatgactaccaagctggtagttatctggacaaactcagg
aaagaactccatatgagaaaactcaccaacacacacagcgctctgacatatgtgctgaac
aacattttgaaaaacccaaaagcaggcgcctctcctgatgcaactaaagtggtggtacta
ataacggatggagatcccagtgatagagacagagggattattaaaagatatgatgatcaa
aacatcattcgctttgtcattggggtcaaaaacgctgacctggagaaattcagagccatt
gcttcagaaccgaaagacaaaaatgccttcaaaattgagaactatgacggactcaaagga
gtactggaaaactttcaaaaaaagatctttcaaatggaaggctccaaagtgtctcgggct
ggagaattgaccaatgaaatgtctcagagtggattcagtgctgtcttcttcaacgatacc
ctgattctgggttcagtgggatcaaacagctggcgtggttctctccaagatcgccgtgga
gagatagaaacacaaattgaagatccacacatgctggatgactcctacctgggatactct
atttctgttggaaagaagaataatgctccaatttatttcgccggggcaccaagatttaat
cacaaaggacaggtcgtacttttcagacatgaaggcaaaaactggacggcatcccaaaga
gttaacggggaacagattggctcctactttggcgcagagctgtgctcagtagacacagac
tcagacggtaacactgatttcctgctggtgggagctccacagttttaccagcctcaggag
aagagggaaggtcagatctacatctacacactgactgatgagatgcaactgaaaggtgaa
ctgactgtgactgcaccctccatggggagatttggcaccaccatatccagccttgccgat
ctgaatggagatggactgcgagatgttgctgttggagctcctcttgaggacaataacagc
ggggttgtgtacatctatcttggcgacagaatcagagggatacggagcgattacagccag
agaatcattggtcataaaatagatctccggctgagattctttggacagtccattgatggg
gacattgaccttggagaggatggactcccagatattgtggtgggatcacagggcatagct
gttgtgttaaggtccaggcctgtctttaatgtcatggcttctctgtattttcaacctaaa
gagataaacacagacaaaattgagtgccttggcaacacagatgcaaatttaccaatggta
accctaacagcctgctttgaaatggtagaaacaacaagaagtaaagcagaggaattgagc
tccacgttgaacatctcgtactcgatcgacgtggatcccacgagaactactatgtatcga
ggtttcttcagtgaaaccgaccggaaagctagaaatctcacctctacccccgagctgagg
gataaagacacctgcttcaaccactccatctacatgcagaaatgtgtgaaagacacacta
atgcccatcagcatcaaattacagttttcccaagttgacagtgtgagcgcgagcgccgtc
ctgaatgtggacagcaaaacgcaggctactgttgaggttccatttgaaaagcattgtaag
aaaaatgacacttgtgttgcgcaacttgaggtggatttcaacttcacgaccgcaacattg
ttggtggcagaagataacttcctcaacgtgtctgtcaaactatccaatagcggtgatgac
tcatactacaccagcctaacaatgcactaccctccaggcctctccttctccatgatggtt
cttacagagtcaaccagaccaacgctccacagttgtaatgatctagaaggagttctcaac
aaaacaatatgtggtgtcagccggcccgtgtttcgcagcagatcctccgcaacatttaga
gcttctttccgcatcataaatgagtacgagtggaatgatacaattgtgatgaccataact
ggaaaaagtgaaaacacaaactccaacaataccaataccttgaccaaggacatcccagta
cagtttgaaatcaaaatggcagtaacagtgaaagaagaccttattagctatctgaacttc
acaacagaggacactggacctaaacaaatagttactacatataagataggtaatcttggt
tttaaggactttcctgttaatgtgtccctgttcttcccaaccaaactggaccataacttt
gaaatgacaaactatcaagtcattgtccagcagaacaaaactcagtgctcaaggaaaact
gacaaggaatcggaatactgctcaccagacaaaccgtgcaaagtcattttatgtgacagt
tttatcctggagaaagaatcacccactgagattacattgataggagatgtacagtttagg
gatctcaaacaacatgcagcgaatattgcttttcttaaacgatatactggagattctgca
gaggttaaatttaaaagcttcatagaggttgactatgacaacaaccgatatgtgctcagt
tcttacaaaaaagtggagaagtatgacaacgatccaacacggaaatggatggaagttcga
gttgagtttataatccccccggatgaactgctgatcattttaactggatgtggacttgga
ctcttgcttctgatcataatcacagtcatcatgtttaagttgggttgttttaagaggaaa
acgctcgagtattaccaggaccaggaggaagaagctcttcaggctgcccccctagccccc
accaataagacagtcagccaatcagagactgacgacaaatctgaccaactggcagaggaa
aaaatgtttctcgatgacggtgaggcgagcggcagctccccacccactgatacaatggaa
gtactggaataa
DBGET
integrated database retrieval system
