Trematomus bernacchii (emerald rockcod): 117482283 Help Entry 117482283         CDS       T09643                                  Symbol glb1 Name (RefSeq) beta-galactosidase   KO K12309   beta-galactosidase [EC:3.2.1.23] Organism tben  Trematomus bernacchii (emerald rockcod) Pathway tben00052   Galactose metabolism tben00511   Other glycan degradation tben00531   Glycosaminoglycan degradation tben00600   Sphingolipid metabolism tben00604   Glycosphingolipid biosynthesis - ganglio series tben01100   Metabolic pathways tben04142   Lysosome Module tben_M00079   Keratan sulfate degradation Brite KEGG Orthology (KO) [BR:tben00001]  09100 Metabolism   09101 Carbohydrate metabolism    00052 Galactose metabolism     117482283 (glb1)   09103 Lipid metabolism    00600 Sphingolipid metabolism     117482283 (glb1)   09107 Glycan biosynthesis and metabolism    00531 Glycosaminoglycan degradation     117482283 (glb1)    00604 Glycosphingolipid biosynthesis - ganglio series     117482283 (glb1)    00511 Other glycan degradation     117482283 (glb1)  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     117482283 (glb1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tben04147]     117482283 (glb1) Enzymes [BR:tben01000]  3. Hydrolases   3.2  Glycosylases    3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds     3.2.1.23  beta-galactosidase      117482283 (glb1) Exosome [BR:tben04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    117482283 (glb1) BRITE hierarchy Motif Pfam:  Glyco_hydro_35 BetaGal_ABD_1 BetaGal_gal-bd BetaGal_ABD2 Glyco_hydro_42 Motif Other DBs NCBI-GeneID:  117482283 NCBI-ProteinID:  XP_033986238 EnsemblRapid:  ENSTBNG00005024002 LinkDB All DBs Position Unknown AA seq 648 aa AA seqDB search MALLGFGNILLLLLLFENSLGAPGSFSVDYQRDCFRKDGEEFRFISGSIHYSRIPRVYWK DRLLKMYMAGLNAIQTYIPWNYHEESPGQYSFSGERDMEYFLQLAQDIGLMVILRPGPYI CGEWDMGGLPAWLLNKKDIVLRSSDPDYIAAVDKWMGKLLPMIKPYLYQNGGPIITVQVE NEYGSYFACDYNYMRHLTKLFRSHLGEEVVLFTTDGAGLKFLKCGSIQGLYATVDFGPGN VTAAFNAQRHAEPHGPLVNSEYYTGWLDHWGSPHFVVSSATVTKSLNEMLAMGANVNMYM FIGGTNFGYWNGANTPYGAQPSSYDYDAPLSEAGDLTKKYFAIRDVIKMYRKIPEGPIPP TTPKYGYGTVGMKRLQTISDALEMLSFSGPIKSIYPQTFIELNQAFGYVLYRTKLPANCN TPTPLSSPLNGVHDRAYVSVDGVAVGIIERNKALTVNVTGKDGSQVDILVENMGRINFGN HINDFKGLVSNLTLGKDTLTGWTMYSLSIDEAVSQGLLGETKPTVPSPPAALSLPTFYEG SFVIPDGIPDLPQDTYIKLPKWRKGQVWINGFNLGRYWPSRGPQVTLYVPGSILSNAVPN NVTVLELEGAPCGPGPCSVEFTDTPILNGPVQSDFRQQRRLFSKDDLL NT seq 1947 nt NT seq  +upstreamnt  +downstreamnt atggcgctgctcggatttggaaacatactgctgctacttctgctttttgaaaattcactc ggggcacctggttcattcagcgtggattaccagagggactgcttccgaaaagatggggaa gagtttcgttttatatcgggaagcatccattacagccggatccccagagtctactggaag gaccgactgctcaagatgtacatggcaggactgaatgccatccagacgtacattccctgg aactaccacgaggagtctccaggccagtacagttttagtggagagcgggatatggagtat ttccttcagctggcccaagatattggcttaatggtgatccttcggcctggaccctacata tgtggagagtgggacatgggagggctgcctgcctggcttctcaacaagaaagacatcgtg ctgcggtcgtcagatccagattacatcgcggcagtagataagtggatgggaaagttactg cccatgataaagccatatctctaccagaacgggggtcctatcatcactgtacaggtggag aatgaatatggcagttatttcgcctgtgactacaactacatgcgtcacctgactaagctt ttccggtcccacttgggcgaggaggtggtgctcttcaccacagatggagctggactcaaa ttcctcaagtgtggctcaatacaaggcctttacgccactgtggactttggcccaggtaat gtaacggctgcttttaatgcacagagacacgcagaacctcatggacctttggtgaactct gagtattacactggctggctggaccactgggggtctcctcactttgtcgtgtcatccgcc actgtgaccaagtccctcaatgagatgctggccatgggagcaaacgtcaacatgtacatg ttcataggagggacaaactttggatactggaatggcgccaacacaccgtacggcgcgcag ccctcgagctacgactacgacgcccctctctctgaagcaggagacctcacaaagaagtac tttgctattcgtgatgtcatcaaaatgtaccgtaagataccagagggaccaataccacct acaactccaaagtatggatatgggactgttgggatgaaaaggctccaaacaatttcagat gccttagaaatgctttctttctctggccccatcaaaagcatttatcctcagactttcatc gaactgaaccaggcctttggttatgtgctctacaggactaaacttcctgctaactgcaac acacccacaccactgtcgtctcctctgaacggcgtccatgacagagcgtatgtgtcagtg gacggggtggctgtggggattattgaaaggaacaaggccttaactgtcaatgtgactggg aaagacggcagtcaggtggacatactggtggagaatatgggccgaatcaacttcggaaac cacatcaatgactttaagggcctggtgtccaacctgactctggggaaagacacgctcact ggctggacgatgtacagcctcagcatcgatgaagcggtcagtcagggcctcctcggtgaa accaaaccaacagtcccatctccccccgctgctctctccctccccaccttctatgaggga agcttcgtcattcctgacggcatcccagacctcccccaggacacctacatcaagctgccc aaatggaggaaggggcaagtttggattaacggcttcaacctgggacgctactggccgtct cggggccctcaggtgacactttatgttcctggctccatcctcagcaacgctgtccccaac aacgtgactgtgctggagctggagggcgccccctgcggccccgggccctgcagcgtggag tttaccgacacccccatcctgaatggcccagtacagtctgacttcagacagcagaggagg ctcttttctaaagatgatttgttgtga

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