Trematomus bernacchii (emerald rockcod): 117485763
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Entry
117485763 CDS
T09643
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tben
Trematomus bernacchii (emerald rockcod)
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117485763 (scn1laa)
Ion channels [BR:
tben04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117485763 (scn1laa)
BRITE hierarchy
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
ATP-synt_B
Zip
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117485763
NCBI-ProteinID:
XP_033990346
EnsemblRapid:
ENSTBNG00005025254
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MAQLLVPPGPDSFRPFSRESIKVIEKRITEENAKKPKKEKNKRNDENEIKPSRDLEAGKS
LPLLYGDTPKGMVSTPLEDLDPYYMNHKTFIVLNRGNSLFRFNADSALYLLSPFNLIRRI
SIWILVHSLFNIVVMCTILANCAYMTRSGRPSVWAKNIEYTFTAIYTLESLIKILARGFC
IGRFTFLRDPWNWLDFSVIVLAYVTEVLPVGNFSALRTFRVLRAFKAISVIPGLKTIVGA
LFQSVKKLANVMILTVFCLSVFALVGLQLFMGNLKHKCIRDYNTTLVNNINMTETENLTV
KDYLLDKRFYYILPGKKDALLCGFSPLAGQCPEGFHCEKAGRNPDYNYTSFDSFGWAFLS
LFRLMTQDYWETLYQQTLRAAGKPYMLFFVLIIFLGSFYLINLILAVVAMAYEEQSQATI
KEAKEKEEEFQAMIEQLKRQQEDAQAAATAAAAERGEASDKPSGLESSSDSKLSSKSAKE
RRNRKKKRQEDGKGDDKKVSKSESQDSIKKGRCRFSVDANQLNYDMKCSPMHQADTTDTE
YRPGGGAAQECIDFLDGPEARQRALSTASVITSTVEELEELRQKCPPCWYNFANTFLIWE
CCPRWLRIKRNVRLVVMDPFTDLTITICIVLNTLFMAMEHYPMYDHFSKMLYVGNLIFTT
IFTAEMVFKIIAMDPYYYFQEKWNIFDSIIVSLSLMELGLETVEGMSVLRSFRLMRVFKL
AKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKHYKDCVCKISEKCIL
PRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGTPMCITVYMMVLVIGNLVVLNLFLA
LLLSSFSSDNLAGIEDDTDMNNMQVAIGRIHNGIAFVKSLLRSSCNSACLRRKKKRKGED
KTLDELHKPLGPNGVPNHTIKDFSKNGNGDVTGVDKNGDKYIVSSKSDDSIMSFIHNPSL
TVTVPIALGESDFENLNTEDFSSLSSDIVGCTEIAEDDDQVSSSEGSTIDGLPGGEGVES
VDFELEEFAEPDACFPDRCVRKYQCCQVKVEVGWWKVWWTLRKTCFRIVEHNWFESFIIF
MILLSSGALAFEDIYIEQRKTIKTMLEFADKIFTYIFILEMLLKWVAYGYAKYFTNAWCW
LDFLIVDVSVVSMVANAMGYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPS
IFNVLLVCLIFWLIFSIMGVNLFAGKFGYCANKTTNEELSMSVVTNKTECDSMYDARWKI
HKVNFDNVGMGYLALLQVATFKGWMEIMYAAVDSRSQNEQPDYEYSLHMYAFFVIFIIFG
AFFALNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNQI
QGYVFDFTTKQAFDILIMVLIWLNMVTMMVETEDQSEEKKDVLYWINWVFVIIFTGECLL
KMIALRQYFFTNGWNVFDFIVVVLSIIGMCLSKLIEKYFVSPTLFRVIRLARIGRVLRLI
KSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGIDDLFNFETF
GNSMICLFQITTSAGWDGLLAPILNKHEDDCDNSTEHPGSQIKGDCGNPPVGIAFFVSYI
IICFLVVINMYIAVILENFSVATEESTDPLSEDDFETFYEVWERFDPHATQFMEYKKLSE
FADALDPPLRIPMPNKMILISMDLPMVNGERIHCLDILFAFTKRVLGEGGEMDILRGQME
ERFMASNPSKVSYEPITTTLRRKQEDTSAVVIQRAYRVYARSRVFMKPSNRSGVNIQRDG
THIDKEDVVTDKLQDISSADKSELTPSAALQPSCNSVTSNGRHKYEKDKSEKEVEGKDVR
EQ
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtacccccaggtccagacagcttccgcccctttagtcgtgagtcc
atcaaagtcatcgagaaacgtatcacagaggagaacgccaagaaaccaaagaaagagaag
aataaacgcaacgatgagaatgagatcaagcccagccgtgacctggaagcgggcaaatca
ctccctctcctgtatggggacactcctaaaggcatggtgtcgacaccgctggaggacctg
gatccatactacatgaatcataaaactttcatagtattaaacagaggaaatagtctcttc
cgcttcaacgccgattctgccttgtacctcctgagtcccttcaaccttattagaagaata
tcaatttggattttggtacattcgttatttaatatcgtggtcatgtgcactatcctcgcc
aactgtgcatatatgacacggagtggtcgtccgtctgtgtgggcaaagaatatagaatac
acatttactgcaatctatacacttgaatccctcataaaaatcttagcccgagggttctgt
attgggaggttcacgtttctaagagatccctggaactggctggattttagtgtcattgtg
ttggcgtatgtaacagaggttttacccgtaggcaacttttcagctcttcgcacattcaga
gtgctgagagcatttaaagctatttcggtaatcccaggcctgaaaaccattgttggtgca
ttgttccagtcagtgaagaagctcgccaatgtgatgattctcaccgtcttctgcttgagc
gtcttcgccctcgtaggactacaactgtttatgggcaatttaaaacataagtgtatccgg
gactataatactacactagttaataatatcaatatgactgaaacagagaatctcacagtg
aaggactacctgctagataagcgtttttactatatccttcctggtaaaaaagatgcattg
ctttgtggatttagccctttagctgggcaatgcccagaggggttccattgcgaaaaagca
ggaagaaatccagactataattacaccagttttgactcctttggttgggcctttctctct
ctgtttagactgatgacgcaggattactgggagactctttaccagcagacattgcgagca
gctgggaagccctacatgctcttttttgtgctgataattttcctcggttccttttatctg
atcaacctgatcttggctgtagtagctatggcctacgaggagcagagccaagccaccata
aaggaggcgaaggagaaggaggaagagtttcaggccatgatagagcagctgaaacggcag
caagaggacgctcaggcagcagcaactgcagcggctgctgagagaggcgaggccagtgat
aaacccagtggcctggagagctcttctgactctaagctcagctcaaaaagcgccaaagag
agacgcaacagaaaaaaaaaaaggcaggaggatggcaaaggggatgacaagaaggtctct
aaatccgagtcgcaggacagtattaagaaaggtcgctgccgcttctctgtggatgcaaac
cagctcaactatgacatgaaatgctcacccatgcatcaggctgacaccactgacacagaa
tacagaccgggtggaggagcagcccaggagtgtattgacttccttgatggcccagaggct
agacagagagctctcagtacagccagtgtcataactagcacagtggaagagcttgaagag
ttgaggcagaagtgtcctccttgctggtacaattttgccaacactttcctcatctgggag
tgttgtccgagatggttgaggatcaagaggaacgttagactagttgtgatggaccccttc
acggacctaaccatcaccatctgcattgtgctcaacacattgtttatggccatggagcat
tatccaatgtatgaccatttctccaaaatgctgtatgtgggaaatttgatttttactacc
atcttcacggcagaaatggtcttcaagatcattgctatggatccatactattacttccag
gagaaatggaatatttttgattcaatcattgtcagtttgagcttgatggagcttggcttg
gaaaccgtggaaggcatgtctgttctgagatcattcagattgatgagagtattcaagttg
gctaaatcgtggcccactcttaacacactaatcaagataattggcaattcagtgggggct
ttgggcaatctgacgctggtgctggccattatcgttttcatttttgcagttgtgggcatg
caactgtttggaaaacactacaaggactgtgtgtgtaaaatctctgaaaagtgcattctg
ccccgttggcacatgaacgacttcttccattcatttctcattgtgttccgagtgctttgt
ggagagtggatagaaaccatgtgggactgtatggaggtggctgggacacccatgtgcatc
actgtctacatgatggtcttggttattggaaaccttgtggtgctgaatctgttcctggcc
ctgctgctgagttcattcagttctgataacctcgcggggatagaggatgacacggacatg
aacaatatgcaggttgccattggaaggattcacaatggcattgccttcgtcaagtccctg
cttcgaagcagctgcaatagtgcctgtctcaggaggaagaagaaaaggaagggtgaagac
aaaaccctggatgagctccacaaacctttagggccaaatggtgtccccaaccataccatc
aaagacttttctaagaatggaaatggggatgtgaccggagtggacaaaaatggagacaag
tacatagtcagtagcaagagtgatgattccattatgtctttcattcacaaccctagtctg
actgtcactgttcctattgctctgggagaatcagactttgaaaacctcaacacggaggac
ttcagcagtctctcgtctgatatagtaggctgcactgagattgcggaagatgatgaccag
gtcagctcctcagaggggagtacaatagacggtttgccaggcggtgagggagtagagtct
gtggactttgaattggaagaatttgctgaacctgatgcctgctttcctgacaggtgtgtg
cgaaagtaccagtgttgtcaagtaaaagtggaagtgggctggtggaaggtgtggtggacg
cttagaaagacttgtttccggatcgtggagcacaactggtttgagagcttcatcattttc
atgatcctgctcagcagtggagcactggcatttgaggacatctacattgagcagaggaag
accattaaaacgatgttggagtttgcggacaaaatcttcacctacatcttcattctggag
atgttactgaagtgggtggcctatggatatgccaagtattttacaaatgcctggtgctgg
ctagacttcctcattgtcgatgtctcagtggtcagtatggtagccaatgccatgggatat
tctgaccttggtgccatcaagtctctgagaacccttcgagctctgaggccactgagagcc
ctgtctcggtttgaaggcatgagggtggtggtcaatgccctgcttggagcaattccttcc
atcttcaatgtgctgctggtttgtctcatcttctggctcatcttcagcatcatgggagta
aacttatttgcggggaagttcggctattgtgccaacaaaaccacaaatgaagagttatct
atgtcagtggtgacaaacaagacagaatgtgacagcatgtacgatgctcgttggaagatc
cacaaagtcaacttcgacaatgttggtatgggataccttgcattgctgcaagtggctaca
ttcaagggctggatggaaatcatgtatgctgctgtggactctcgaagccagaatgaacaa
ccagattatgagtacagcctgcatatgtacgcgttttttgttattttcatcatatttgga
gccttcttcgctctcaatctcttcattggtgtcatcatagacaacttcaatcagcaaaag
aaaaagtttggaggtcaagacatcttcatgactgaagaacagaagaaatactacaatgcc
atgaaaaagctggggtcaaagaaaccacaaaagcctattcctagaccatcaaaccaaatt
caaggatatgtctttgacttcaccacaaaacaagcattcgatattttaataatggttcta
atatggcttaatatggtaaccatgatggtagaaactgaagaccagtcagaagaaaaaaaa
gacgttctttactggatcaattgggtattcgttatcatctttactggagagtgtttgttg
aagatgatcgctcttcgccaatacttcttcacaaatggttggaatgtatttgacttcatc
gtcgtcgtcctgtcaatcatcggaatgtgtctctcgaaactgatagagaagtattttgtt
tcgccaaccttgttcagagtcatccgattggctcggattggccgtgtgctccgccttatt
aaaagtgccaaaggaattcgcacactcttgtttgccttgatgatgtcacttcctgccttg
ttcaacattggtctcttgctctttttggtgatgtttatctatgctatctttggcatgtca
aacttcgcttacgtcaagaaggaatcaggcattgatgaccttttcaattttgagacattt
ggcaacagcatgatctgtttgttccagatcaccacctcagcggggtgggatggccttctt
gcgcccattctcaacaaacatgaagatgattgtgacaattccacggagcatcctggcagt
caaattaagggagactgtggaaatccccctgtggggatcgccttctttgtgagctacatc
atcatctgtttcctggttgtgataaatatgtacattgctgttatcctggaaaacttcagt
gtggccactgaggagagcaccgacccactaagtgaggatgattttgaaacgttttacgag
gtctgggaaaggtttgatcctcatgcaacacagttcatggagtacaaaaagctttcagaa
tttgcagatgctctggacccaccgttacgtatacccatgcctaacaagatgatactgatc
tctatggatctacccatggtgaatggtgaacgcattcactgcctggacattctgtttgca
ttcacaaaacgtgttcttggtgaaggtggggagatggacatcctaagggggcagatggag
gagcgcttcatggcctccaatccttccaaagtttcctatgaaccaatcactaccaccctc
cgtcgcaaacaggaggacacatcagccgttgtcatccagagagcatacagagtttatgca
aggagccgtgttttcatgaagccctcaaacagatctggtgttaacattcaaagggatgga
acacacattgacaaagaggatgttgtcaccgacaaactccaagacatttctagcgccgat
aaaagtgaactgacaccttcagcggcccttcagccttcatgtaacagtgtgacttcaaat
ggaagacacaaatatgaaaaagacaaaagtgaaaaggaggttgagggcaaagatgtcaga
gagcaatag
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integrated database retrieval system
