Trematomus bernacchii (emerald rockcod): 117494371
Help
Entry
117494371 CDS
T09643
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04510
Focal adhesion
tben04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117494371 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117494371 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
F5_F8_type_C
TPR_MLP1_2
EzrA
Motif
Other DBs
NCBI-GeneID:
117494371
NCBI-ProteinID:
XP_034001137
EnsemblRapid:
ENSTBNG00005023516
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MKASLLMLACVLAVAVGQEPDYSHGCAHGSCYPATGDLLVGREKSLKASSTCGMRKKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRMENVITTFKPHRKKSWWQSENGKSDVIIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGRTWQIYRYFSHDCASAFPGVSQGPLRN
INDVICESRYSDIEPSTEGEVIYRVLEPSIRIEDPYSPSIQSQLKITNLRINFTKLHTLG
DNLLDPRAEIKEKYYYAMYELVVRGNCFCYGHASECARIDGIRADIEGMVHGRCVCNHNT
RGLNCEECDDFCNDLPWRPAEGRNTNACKKCNCNGHSSTCHFDMAMYQATGNVSGGVCDD
CLHNTMGRNCEMCKPFYYQDAFKDIRDPQVCVACDCDPDGSQNGGMCDSHTEPSLGMVGG
QCRCKANVEGPRCDKCKTGYFGLSAENPQGCQPCRCDPRGTVSGRSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLNGCRGCECDIGGAHDNHCSMESGQCRCRSHMAGRQCTQVE
SRYFFMALDHFLYEAELAKMGQGCTLETREHQQGRPASWTGLGFARVPEGGTLEFLITDI
PYSMEYDLLIRYESQMPRDWEEVRITIVRPGPIPTSSPCGNTIPDDDRFLVSLPAGARFM
LPPRAVCLEQGVTYTLRFEFRRYQDANSVLNGAANALLLVDSLALMPRHSSMEMFTAGDV
ASNNRKQTFERYRCHERAKSVTRPMISDTCAKIITSMSAIINNGALPCNCDLQGSISAMC
DVRGGQCPCRPSVIGQRCDQCAPGTYGFGPSGCIACGCSLEGAVTRLCDKFTGQCQCRPG
AFGLRCDGCQSGHWGFPNCRLCQCNGHAEQCDQRTGACINCRDNTGGDKCDRCGNGYYGN
PILGKAANGQCRPCQCPEGPNSGRHFAASCYQDNHNRQIVCNCNQGYTGIVKRSGVTIYK
RARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSDMKACDRRTGECRKCLYNTEGPICGI
CKSSYFGDASRRNCRKCTCNFLGTDREQCMEREDCVCQRATGQCQCLPNVIGLTCDHCAP
NHWNLANGKGCDACGCDPNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQETYWGDPSTQCR
VCDCDWRGIESSQCNRVTGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRIV
QDLAVRTKTLAERAHEIQTTGLTGPYEKAFKDLEEKLKRAQEIVNARNATAAAVATLMEL
IEDLRAQIGETTDALNRLEGDLTVVQDGNSEASKELSALEREAKELNLTSQQLHRQLDTL
KNSNFLGAYDSVRISYNKSRDAERRANESTTTKPSTVSQSADTRRRTERLISAKKDDFNR
KNAANKRALGDLNTRAQGLDLKKINEKVCGAPGDVPCGESPCGGAGCRDDEGNRHCGGLN
CNGAVAVADNALERSKHAEKELNKAMGEVEGLFTKVADAKTKAEEAKEKAQAALDKATAT
KNKVERSNNDLRDLIKQIREFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKE
RVRSLSNVDAILQQTQGDVRRAEQLLLDAKRARHSAEGVKTTAETVKQALAGAQTAQTSA
EKAIAIAKADIGDTEARLVQIESETSNNEKDLTEAMDRLGTLGQEIAALKTKRANNSMAA
ARAEETATMARDKANEAKQILDGQLTDKYHEVQQRVDTKAKAVQEAKKKAERLRDEAKEL
LKDAQDKLQRLAELEKSYEENQRRLEGKARQLDGLEDKMKAILTDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtcactactaatgctcgcctgcgtcctggctgttgccgttggccaggagccc
gactacagccacggctgtgcccatggcagctgttacccggcaacaggagacttgctggtt
ggacgagagaagagcctgaaggcctcgtcgacatgtgggatgaggaaaaaggagccttac
tgcattgtcagccatttgcaggatgagaagaagtgtttcgactgtgactccaggcggcca
tatgacccagtgtacaacaccattaatcaccgcatggagaacgtcatcaccacctttaaa
cctcaccgcaagaagtcctggtggcagtccgagaatggaaagtctgatgtcattatccag
ctggatctggaagcagagtttcatttcactcacctgattatgacctttaagactttccgc
ccggctgccatgctgattgaacggtcgtcagattttggtcgcacctggcagatctaccgc
tacttttcccatgactgcgcctctgcattccccggagtctcccagggtcctctgcgcaac
attaatgatgtcatttgcgagtcccgctactctgacattgagccgtcaactgagggagag
gtcatctacagagtgttggagccttccatcaggattgaggatccatacagccctagcatc
cagagccagctaaagatcactaacttgagaataaacttcaccaagcttcacacactggga
gacaacttgctagaccccagagctgaaatcaaagaaaagtattactatgccatgtacgag
cttgtggtacgtggaaactgcttctgctacggccacgcctccgagtgcgcccgcatcgac
ggcatcagggccgatatagaaggaatggttcacggcaggtgtgtgtgcaaccataacact
aggggtttgaactgtgaagagtgtgatgatttctgcaatgacctgccctggagaccagcc
gagggacgcaacaccaacgcctgcaagaagtgtaactgtaacggccactccagcacgtgc
cacttcgacatggccatgtatcaggccacgggaaatgtgagcggaggagtgtgtgacgac
tgtctgcacaacaccatgggacgcaactgtgagatgtgcaaacccttctactaccaagat
gctttcaaagatatcagggacccacaagtctgtgttgcctgtgactgcgacccggatggt
tctcagaatggagggatgtgcgacagccacacagagccctcccttggcatggtgggaggt
cagtgccgctgcaaggccaatgtggaggggccgcgctgcgacaagtgtaagaccggctac
ttcggcctgagcgctgaaaaccctcagggctgccaaccttgccgctgtgaccccagagga
acagtgtcaggtcgctcccagtgtgaccccgtcagtggagactgcttctgcaagcgtctc
gtcactggacgcagctgtgaccagtgtttgcctgaacactgggctctgagtcacgacctg
aacggctgccggggctgcgagtgtgacatcggaggagcccatgacaaccactgctccatg
gagagcggtcagtgtcgctgccgcagccacatggcaggacgccagtgtacgcaggtggag
tccagatacttcttcatggctctggatcacttcctgtatgaggctgagttggccaaaatg
ggacagggctgtacactggagaccagggagcaccagcagggtcggcctgcatcatggacg
ggcttggggttcgctcgggtccctgaggggggcaccctggagttcctcatcactgacatc
ccctactccatggaatatgacctgctgatccgctatgagtcacagatgccccgggactgg
gaggaggtgcggataacgatagtccgtcccgggcccattcccaccagcagcccctgtgga
aacaccatcccggacgatgacagattcctcgtctctctgccggctggagccaggttcatg
ctccctcctcgggctgtgtgtctggagcaaggtgtgacctacaccctccgctttgagttc
agacgctatcaggatgctaacagtgtcctgaacggagcggcgaacgctctcctgcttgtg
gactctcttgcgttgatgccacgccactcctccatggaaatgttcactgcgggagatgta
gcttcaaacaacaggaagcagaccttcgagcgctaccgctgccacgagagggcgaagagc
gtgacccgccctatgatcagtgacacctgcgccaagatcattaccagcatgtcggccatc
atcaataacggggctctgccctgtaattgcgatcttcaggggtcaatcagcgccatgtgt
gatgtccgtgggggccaatgtccctgcaggcccagtgtgattggtcaacgctgcgatcag
tgtgctccggggacttatggctttggaccctcaggctgcatagcctgtggttgcagcttg
gaaggcgccgtgactcgtctttgtgacaagttcacgggtcagtgccagtgccgccccgga
gcgttcggtctgcgctgtgatggctgccagtcgggtcactggggcttccccaactgcaga
ctctgccagtgtaacggacacgcagaacagtgtgaccagaggaccggagcctgcatcaac
tgcagggacaacaccggaggagacaagtgtgacaggtgtggcaatggctactacggtaac
ccaattttgggcaaagcagccaatggtcagtgtcgcccgtgccagtgtccagagggcccc
aacagcggacgccactttgctgcatcttgttaccaagacaaccataacagacaaattgtc
tgcaactgtaaccagggttacacagggattgttaaacgctccggggtcaccatttataag
cgagctcgctgtgaggaatgtgctccgggttattacggcaacccctctcaacccggaggc
cgctgccagccgtgccagtgcaacaacaacatcgacatgtcagacatgaaggcttgcgac
aggcggaccggagagtgcaggaagtgcctctacaacaccgagggccccatctgtggcatc
tgcaagagcagctacttcggggacgcttccagacgcaactgcaggaagtgcacatgtaac
ttcctgggtaccgaccgtgagcagtgtatggagcgtgaggactgtgtgtgccagcgtgcc
acagggcagtgccaatgtctgccgaacgtcatcggcctgacatgtgaccactgcgccccc
aaccactggaacctggccaacgggaagggatgtgacgcctgcggctgtgaccccaacaac
tctgtcacctcatcatgtaacgagttcactgggcagtgccagtgtcgtgatggctttggt
gggaagacgtgcacagactgtcaggagacctactggggagacccgagtacacagtgcaga
gtgtgtgactgtgactggcgaggcatcgagtcctctcagtgcaacagggtgacgggccac
tgtgtgtgccagcagggggtgtcgggggtccgctgtgaccagtgtgcccgaggcttctcc
ggacagttccccaactgtcagccctgtcaccagtgcttcggggactgggaccgcattgtg
caggacctagcagtgcgtacaaagactctggcagagcgtgcccatgagattcagaccacc
gggctcactgggccctatgagaaggctttcaaggacctggaggaaaaactgaaacgagct
caggagattgtcaacgcgcgcaacgccaccgcagcagccgtcgctacactgatggagctt
attgaagatcttagagcgcagatcggtgagaccactgacgccctgaaccgtctggaggga
gacctcacggtcgtgcaggacggcaactctgaggccagcaaggagctgagcgctctggag
agagaggctaaagagctgaacctcacctcccagcagctgcaccgccaactggacaccctg
aaaaactccaacttcttaggtgcgtacgacagcgtccgtatctcctacaacaagtctcgt
gatgcagagcgccgtgccaacgagtcaacgaccaccaagcccagcacggtcagccaatca
gcagacactcgccgccgcaccgagcgcctcatctccgccaagaaggacgacttcaaccgt
aaaaatgctgccaacaagcgcgcgcttggagatctcaacaccagagcacagggcctggac
ctcaagaagatcaatgagaaggtgtgcggcgccccgggtgacgttccctgtggtgaaagt
ccttgtgggggtgcaggttgccgtgacgatgaagggaaccgtcactgtggaggcctgaac
tgtaacggcgctgtggcagttgcagacaacgccctggagagatccaaacacgcagagaag
gagctgaacaaagccatgggagaggtggagggactcttcacaaaggtggcagacgccaag
accaaggcagaggaggccaaagaaaaagcccaagcagctctagacaaagccacggccacc
aagaacaaagtggagcgctccaacaacgacctgagagacctcatcaagcagatcagagag
ttcctcactcaggagggtgcagacccagacagcattgaggccgtggccaaccgcgtgttg
gagctctccatccccgcctcccccctgcagatcagacacctcgctgatgaaatcaaagaa
cgagtccgcagcctctccaacgtggacgccatcctgcagcagacgcagggcgacgtccgc
agagcggagcagctgctgctggacgccaagagggccaggcacagtgcagagggagtgaag
acgacagcggagacagtgaagcaggcgctggccggcgctcagacggctcagacgtccgca
gagaaggccatcgccatcgccaaggctgacatcggggacactgaagcccgcctggtgcag
atcgagtcagagacctccaacaatgagaaggacctgacggaggccatggaccggctggga
accctggggcaggagatcgctgccctgaagaccaaacgggccaacaacagcatggcagca
gcccgagcagaggagaccgccactatggcacgagacaaggcaaacgaggccaagcagatt
ctagacggccagctgacagataaataccatgaggtgcagcagcgggtcgacacgaaggcc
aaggctgtgcaggaagcaaagaaaaaggcagagaggctccgagatgaagcaaaggagctc
ctgaaagacgcccaggacaagctccagaggctagcagagcttgagaaaagctacgaggag
aaccagaggaggctggaggggaaagctcgtcagctggatggcctggaggacaagatgaaa
gccatcctcactgacatcaacaaacaaatccagatctacaacacatgccagtaa
DBGET
integrated database retrieval system
