Trematomus bernacchii (emerald rockcod): 117495222
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Entry
117495222 CDS
T09643
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta isoform X1
KO
K04816
nicotinic acetylcholine receptor delta
Organism
tben
Trematomus bernacchii (emerald rockcod)
Pathway
tben04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tben00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117495222 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tben04040
]
117495222 (chrnd)
Ion channels [BR:
tben04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117495222 (chrnd)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117495222
NCBI-ProteinID:
XP_034002265
EnsemblRapid:
ENSTBNG00005022727
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MKLQPAALISVFLLALLSAECSCRNEEERLINFLITEQGYNKELRPVKRQQDVVDVYLAL
TLSNLISLKEVDETLLTNVWIDHTWDDFRLAWNETEFDGIAELRLPSKMLWLPEIVLENN
NDAQFEVAYYSNVVVYSSGLCYWLPPAIFRSSCSINVNYFPFDWQNCTLKFVSLTYNAKE
IRMNLKQEWSEDGNTLLYLVEWIIIDPASFTENGEWEINHRPAKKNTYKHIPMESNKHQD
ITFYLIIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLI
SQRLPETSMSVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMSDWTKKIFLEQL
PRILHMSHQTAAEPYWDGALPRRTSSVGYIASAEEYYSVKSRSELMFEKQSVRHGLITRA
THSSVVKPQAEDGVTDQLYAEIKPAVDGANYIIKQMRNKNDFNEEKDNWSGVARTVDRLC
LFLVTPVMTIGTVIIFLMGVYNIPPPLPFQGDPYDYSEINPRLP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccagcctgccgctctgatctccgtcttcctcctcgctctgctctcagctgag
tgctcgtgcaggaacgaggaggagcgtctgatcaacttcctgattacagagcaaggatac
aacaaagagctgcgacccgtaaagaggcagcaggatgtcgtcgatgtttacctcgccctc
acactctccaacctcatctctctgaaagaggtggacgagactctgctgacaaacgtatgg
atagatcatacgtgggatgacttccgccttgcatggaatgagacagagtttgacggcatc
gcggagctgcgtctgccttccaaaatgttgtggctgccggagatcgtgctggaaaacaat
aacgacgcccagttcgaggtggcgtactacagtaacgtggtggtgtattccagtggtctc
tgctactggttaccgcccgccatcttccgctcctcctgctccatcaacgtcaactacttc
cccttcgactggcagaactgcacgctcaaatttgtctctctgacctacaatgccaaagag
atcaggatgaatcttaagcaagagtggtccgaagacggaaacactctcttgtacttggtg
gagtggatcatcatcgaccctgccagctttacagagaacggtgagtgggagattaaccac
cgcccggccaagaaaaacacgtacaaacacatccccatggagagcaacaagcaccaggac
atcaccttctacctgatcatcaaacgcaagccgctattctacatcgtcaacatcatcatc
ccctgcgtgctcatctccttcctcgcgtccctggtctactacctgccggctgacagtggt
gagaagatgaccttgtctatctccgtgctgctggctcagtctgtcttcctgctgctgatc
tctcagaggctgccagagacttctatgtctgttccacttattgtcaaatacttgatgttc
atcatggtgttggtgacggtggtggtgttgaactgtgtggtcgtcctcaacctgcacttc
aggaccccgagcacacacgtcatgtctgattggaccaagaagattttcctcgagcaactg
cctcgcatccttcacatgtcccaccagaccgcggcggagccatactgggatggagcgttg
ccacggcgaaccagctctgtgggctacatcgcctcggcggaggagtactacagtgtgaag
tctcgcagcgagctgatgttcgagaaacagtcagtgaggcacggactgataacccgcgcc
acacactcatcagttgtgaagcctcaggctgaagacggggtgacggatcagctgtatgcg
gagatcaagccggcggtggacggagcgaactacatcatcaaacaaatgaggaacaagaac
gacttcaacgaggagaaggacaactggagcggtgtcgcccgaacggtggaccgtctgtgt
ctcttcttggttaccccggtgatgaccatcggcaccgtcatcatcttcctcatgggcgtc
tacaacatcccaccccccctgcccttccagggagacccctacgactacagcgaaataaac
cctcgcctgccttaa
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