Trueperella bernardiae: QPC17_07665
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Entry
QPC17_07665 CDS
T09150
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
tber
Trueperella bernardiae
Pathway
tber00190
Oxidative phosphorylation
tber03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tber00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
QPC17_07665
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPC17_07665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tber03019
]
QPC17_07665
Enzymes [BR:
tber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
QPC17_07665
Messenger RNA biogenesis [BR:
tber03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QPC17_07665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
RE_NgoFVII
AcetylCoA_hyd_C
Motif
Other DBs
NCBI-ProteinID:
WIM07619
LinkDB
All DBs
Position
complement(1664873..1667302)
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AA seq
809 aa
AA seq
DB search
MSDEHLADDSALVESTPSDHLDFDDVPEPAIQEFLDEDEDVSELTSQEMANLRARVQEMR
LGASVSTAALVEEAERLVRETEAAEEARHNQPDGEPGDPSNSALGMLPEGRFLDRELSWL
AFNERVLEQAEDQTLPVLERAWFLAIFASNLDEFYMVRVAGLMRRIATGMAVTKASGLTP
RQVLEGITVRTKELQERHARVFAEDVQPKLAEVGIVIQHWSDLGETEKDRLSKFFRKQIF
PVLTPLAVDPAHPFPYISGLSLNLAVLVRNPKNDKELFARVKVPQLLPRFIAVDSEGRPY
RPEDVPADEQGKTSYIPLEEVIGVHLDALFPGMEIVEYSTFRVTRNEDLEVEEDDAENLL
KALEKELLRRRFGPAVRLEVENDISKRVLQMLTRELGVREENVLHLPAPLDLTGLNVIHD
LDRPQLKFKKFVPVTARGISDVESSRAADIFAAIRRREILVHHPYESFSTSVQHFIRQAA
DDPKVLAIKQTLYRTSGDSPIVDALIRAANSGKQVLAVVEIKARFDEENNIEWARKLEQA
GVHVVYGIVGLKTHCKLSLVVRQESDGLRRYVHVGTGNYNPKTARGYEDLGLFTCDRDVG
QDATRLFNQLSGYAPKVKFHRLLVAPTGIRSGLIERIEREIANKQAGRNAWIRFKANSLV
DERVIDALYRASQAGVPIDIQVRGICCLRAGIPGMSENINVRSILGRYLEHSRVYAFCND
DDPEVWIGSADLMHRNLDRRIEALIKIVEPDQKEFLIEMVRRATSDDVRSWRMTADGWVH
TIRDAEGNLLADTQEELMARARATVADRR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaacaccttgctgacgattccgctctcgtggaatccaccccgagtgaccac
cttgattttgacgacgttcccgagcccgccatccaagaattcctcgacgaggatgaggac
gtgagcgagctgacctcccaggaaatggcgaacttgcgcgcccgcgttcaggagatgcgc
ctgggcgcgtcggtgtccacggccgcgttggtggaggaggccgagcgcttggtgcgcgag
accgaggctgccgaggaggcgcgccacaaccagcccgacggcgagcccggcgatccttcc
aactcagcgctgggcatgctccccgagggccgcttccttgaccgcgagctgtcctggctc
gcgttcaatgagcgcgtgctggagcaggcggaggatcagacactgccggtgctcgagcgc
gcgtggttcctggcgatcttcgcctcgaacctggatgagttctatatggtccgcgtggcc
ggcctcatgcgccgtattgccacgggcatggcggtcacgaaggcgtcgggcctgaccccg
cgccaggtgttggaaggcatcacggtccgcacgaaggagctgcaggagcgccacgcccgc
gtgttcgcggaggacgtccagccgaagctggcggaggtcggcatcgtgatccagcactgg
tcggacctgggtgagacggagaaggatcgcctgtcgaagttcttccgcaagcagatcttc
ccggtgctcaccccgctggcggtggacccggcgcacccgttcccgtacatttcgggcctg
tcgctgaacctcgcggtgttggtgcgcaacccgaagaatgacaaggagctcttcgcccgc
gtcaaggtcccgcagttgctgccgcgtttcatcgcggtggattcggagggccgcccgtac
cgcccggaggacgttccggcggacgagcagggcaagacctcctacatcccgctggaagaa
gtgatcggcgtccacctggatgcgctgttcccgggcatggagatcgtggagtactccacg
ttccgcgtcacccgtaacgaggacctggaggtggaggaggacgacgccgagaacctcctc
aaggccctggagaaggagctcctgcgccgccgcttcggcccggccgtgcgcctggaggtg
gaaaacgacatctcgaagcgcgttctccagatgctcacccgcgagctgggcgtgcgcgag
gagaacgtgctgcacttgccggccccgctggacctcacgggtctcaacgtcatccatgac
ttggaccgcccgcagctgaagttcaagaagttcgtgcccgtcacggcccgtgggatttcc
gacgtcgaatcctcccgtgccgccgacatcttcgccgcgatccgccgccgcgagatcttg
gtccatcacccgtacgagtcgttctcgacgtcggtccagcacttcatccgccaggcggcg
gacgatccgaaggtgttggcgatcaaacagaccctctaccgtacgtcgggcgattccccg
atcgtcgatgccctcatccgggcggcgaactcgggcaagcaggtgctggcggtcgtggag
atcaaggcccgcttcgacgaggagaacaacatcgagtgggcgcgcaagctggagcaggcg
ggcgtgcacgtggtctacggaatcgtgggcctgaagacgcactgcaagctgtcgctcgtc
gtgcgccaggagtcggacgggctgcgccgctatgtgcacgtgggcacgggtaactacaac
ccgaagaccgcccgcgggtatgaggacctgggcctgtttacgtgcgaccgcgatgtaggc
caggacgccacccgcctgttcaaccagctctcgggttacgcgccgaaggtgaagttccac
cgcttgctggtggcgcccacgggcatccgctcgggcctgatcgagcgcatcgagcgcgag
atcgcgaacaagcaggcgggccgcaacgcgtggatccgtttcaaggcgaactcgctggtg
gacgagcgcgtgatcgacgccctttaccgcgcctcgcaggccggcgtaccgatcgacatc
caggtgcgcgggatttgttgccttcgcgcggggatcccgggcatgtcggagaacatcaac
gtccgttcgatcttgggccgctacctggagcactcgcgcgtctacgctttctgcaacgac
gacgacccggaggtttggatcggttcggcggacctcatgcaccgcaacctcgaccgccgc
atcgaggcgctcatcaagatcgtggagccggaccagaaggagttcctcatcgagatggtg
cgccgggcgacgtcggacgacgtgcgctcctggcgtatgacggccgacggctgggtgcac
actatccgggatgccgagggcaacctgctggccgacacccaggaggagttgatggcgcgc
gcccgcgccaccgtggcggatcgtcgctag
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