KEGG   Trypanosoma brucei gambiense: TbgDal_IV3500
Entry
TbgDal_IV3500     CDS       T06526                                 
Name
(RefSeq) DNA-directed RNA polymerase subunit, putative
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03020  RNA polymerase
tbg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TbgDal_IV3500
  09124 Replication and repair
   03420 Nucleotide excision repair
    TbgDal_IV3500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbg03021]
    TbgDal_IV3500
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_IV3500
Transcription machinery [BR:tbg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TbgDal_IV3500
  RNA polymerase III system
   RNA polymerase III
     TbgDal_IV3500
  RNA polymerase I system
   RNA polymerase I
     TbgDal_IV3500
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TbgDal_IV3500
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF131
Other DBs
NCBI-GeneID: 23859783
NCBI-ProteinID: XP_011772937
UniProt: C9ZMZ5
LinkDB
Position
4:complement(863359..863793)
AA seq 144 aa
MSERDEDEVDRLSLSIGDEHESVAQSDDERSDAGAGVVVSGPAPVRGSAKRRDDRDRVTA
PVLTKYERARILGTRALQISMNAPVLVALEGETDPLTIAQKELREGVIPLIIRRVLPDNT
YEDWRICELDVDFDRPVDERYTNI
NT seq 435 nt   +upstreamnt  +downstreamnt
atgtctgagcgtgatgaggatgaagttgatcgactgagtttgagcattggtgatgagcat
gagagcgtggcgcaaagtgacgatgagcgaagtgatgcgggtgcgggtgttgttgtgtct
ggtcctgcacctgtgcgtggttcagcgaaacggcgtgatgacagagatcgcgtgacggct
ccggtgctgacgaaatacgagagggcccgcatccttgggacacgtgcattgcagattagt
atgaatgctcctgtgttagttgcattggagggtgagacggacccgttgactattgcgcag
aaagagctccgtgaaggtgtcattccgctcattattcggcgtgtgcttccagacaatacg
tacgaggactggcggatctgtgaattggatgtggatttcgacaggcctgtggacgagcgc
tacacaaacatctga

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