Trypanosoma brucei gambiense: TbgDal_VI3270
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Entry
TbgDal_VI3270 CDS
T06526
Name
(RefSeq) tRNA modification enzyme, putative
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
tbg
Trypanosoma brucei gambiense
Brite
KEGG Orthology (KO) [BR:
tbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbg03016
]
TbgDal_VI3270
Enzymes [BR:
tbg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
TbgDal_VI3270
Transfer RNA biogenesis [BR:
tbg03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
TbgDal_VI3270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
23861980
NCBI-ProteinID:
XP_011774134
UniProt:
C9ZR19
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All DBs
Position
6:complement(813535..815142)
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AA seq
535 aa
AA seq
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MKRNSAREGDIEDFFCNSSLSAPRGNCAQNVNSRRRRVVREDYGPGIPGNATIFVHTFGC
GHNVSDGEYMAGQLVESGYNVTDEFGQADAYLLNSCTVKNPSEEHFVSMMNRVRDTGKPL
IVAGCVPQADPTNKQWGDVSVVGVRSIDRVSYVVQEALQGNCVRLLGETEDQRQSNDSNE
LPALDLPKVRRNKYIEIIPISVGCLNNCTYCKTKQARGDLRSYPVEVIVDRVREVVRDGV
KEIRLTSEDSGAYGIDIGTDVVYLLQAVAVELEGTDVMLRVGMSNPPYLLRHVDGFATVL
KHPNVYEFVHIPVQSGSDSILQTMLREYTVEEFFMCIDSIRAAVPKATVATDIICAFPGE
GESEWQETMELCKRAKFEVINITRFYPRRNTPAAAMKQIPTDVAKHRTTELTNFFNSYRT
FDSMVGEVHNVTLLETAHDKHHLVGHTKNYVQVLVDPAQARMGESVVVVITSATKYSVMG
RVLRSRWERLSADAVGFATAPFRTRKGRIASALLMATAVGTVLLYWSSTRRRRCK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaacagtgcgcgggagggagatatcgaggatttcttctgcaacagttcctta
agtgctcctcgagggaactgcgcacaaaatgttaacagtcgacgtcgtcgtgtcgttcgc
gaggactacgggccagggatccctggaaatgccactatttttgttcatacgtttggttgc
ggccacaatgtaagtgacggtgagtatatggctggacaacttgtggaatcggggtacaac
gtcaccgacgaatttgggcaagctgacgcctatcttcttaattcctgcaccgtcaagaac
ccaagtgaggaacattttgtcagtatgatgaatcgtgtgcgagacaccgggaaaccactt
attgtcgccggttgtgtcccacaggcggaccccacaaacaaacaatggggagacgtaagt
gttgttggtgtcagaagcattgaccgcgttagttatgttgttcaggaggcgttgcaaggt
aactgcgtgcgtttgctaggtgaaacggaggaccaacgacagtcgaatgattctaatgaa
ctcccagcgcttgaccttcctaaggttcgtcggaataaatacatcgaaattattcccatt
agtgtgggctgcttaaataactgtacgtattgcaaaacaaagcaagctcggggggacttg
cggagctacccggtggaggtgattgtcgatagggtgcgagaagtggtgagggatggtgtg
aaggaaatcagacttacatcagaggactcgggtgcctacggtattgatataggtacggat
gtagtttatttactacaggccgttgcggtagagttggagggaactgatgtgatgctgcgt
gttggtatgagtaatccaccttacctgttgagacatgtcgatggctttgcgactgttctg
aagcatccaaacgtgtacgagttcgttcatatccctgtgcaatccggttctgacagcatt
cttcaaaccatgctacgtgagtatactgttgaagagttctttatgtgcatcgatagtatc
cgcgctgcagttccgaaggctacagtcgccaccgacattatttgtgcctttcccggtgag
ggcgaatcagaatggcaggaaacgatggaactatgcaagagagctaagttcgaagtgata
aacatcacacgtttctacccacggcggaacaccccagcggcagccatgaagcagatccca
acagatgttgctaaacatcgtaccacagagttaactaacttcttcaattcttatcgtacg
ttcgattcgatggttggtgaggtgcacaacgttacgctactagaaaccgcacacgacaag
caccatctagttggacatacgaaaaactacgttcaagtacttgttgatcctgcgcaagca
cggatgggggagagcgtggtagtggtcattacatcagcaacaaagtacagtgtgatgggt
cgggtgttgcgcagccggtgggagcgcctttcagcagatgcagtgggattcgctactgct
ccatttagaacccggaaaggccggattgcctctgctttgttgatggcaacagctgtggga
actgtgttgctttactggtcgtctacgcgccgcaggcggtgcaaatag
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