KEGG   Trypanosoma brucei gambiense: TbgDal_XI8320
Entry
TbgDal_XI8320     CDS       T06526                                 
Name
(RefSeq) DNA-direcetd RNA polymerase II, subunit 9,putative
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tbg  Trypanosoma brucei gambiense
Pathway
tbg03020  RNA polymerase
tbg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TbgDal_XI8320
  09124 Replication and repair
   03420 Nucleotide excision repair
    TbgDal_XI8320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbg03021]
    TbgDal_XI8320
   03400 DNA repair and recombination proteins [BR:tbg03400]
    TbgDal_XI8320
Transcription machinery [BR:tbg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TbgDal_XI8320
DNA repair and recombination proteins [BR:tbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TbgDal_XI8320
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom zf-Sec23_Sec24 COMM_domain
Other DBs
NCBI-GeneID: 23867865
NCBI-ProteinID: XP_011779977
UniProt: D0A7R2
LinkDB
Position
11:2044782..2045183
AA seq 133 aa
MESTLTQLDDAPMIFCERCNNLLYPESGKEDRVMRWRCNYCKTSEIHDENKLVYILNLKV
KTSTVEELELLAEFANDPTAQRDTTKQCPRCAMNEVTCFVNPLGQPHEDMTLYFACANQG
CRHVWKSSDHQDN
NT seq 402 nt   +upstreamnt  +downstreamnt
atggagtccactttgacgcagttagatgatgcaccaatgatcttttgcgagcgttgtaac
aatctgctctatccagagagtggcaaggaggacagggttatgcgatggcgctgtaactac
tgcaaaacgtctgagatacacgacgaaaataaactcgtatacattttaaacctgaaggtt
aagacgagtactgtagaagaactggaactgttggccgagtttgcgaatgatcccacggct
cagcgtgacaccacgaagcagtgccctcgatgtgcgatgaacgaagtcacatgcttcgtg
aacccccttggacagcctcatgaggatatgacactctacttcgcctgcgccaatcagggg
tgccgtcacgtatggaagagcagcgaccatcaagacaattaa

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