KEGG   Thiocapsa bogorovii: LT988_01395
Entry
LT988_01395       CDS       T07840                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tbog  Thiocapsa bogorovii
Pathway
tbog00740  Riboflavin metabolism
tbog01100  Metabolic pathways
tbog01110  Biosynthesis of secondary metabolites
tbog01240  Biosynthesis of cofactors
tbog02024  Quorum sensing
Module
tbog_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LT988_01395 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LT988_01395 (ribD)
Enzymes [BR:tbog01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LT988_01395 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LT988_01395 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: UHD19024
LinkDB
Position
complement(300225..301337)
AA seq 370 aa
MARAIQLAELGRFTTDPNPRVGCVIVRDGRIVGEGLHRRAGEPHAERHALTEAGERAREA
TAYVTLEPCCHQGRTPPCTDGLLEAGVARVVCAMVDPNPLVAGRGLRLLAEAGVAVETGL
LEAEARALNPGFIKRMEQGRPHVRCKLAASLDGRTAMASGESQWITSEAARRDVQRLRAG
SSAILTGIGTLLADDPSLNVRLGTEDLPGMGPGETIRQPLRVVLDSRWRTPPGARILTLA
GTTLIVGAVDDPGRMAELKGAGVEVYLCPGDSAQVDLGALLSELGRREINEVLLESGPTL
AGAAVAAGLVDEILIYLAPHLMGDAGRGLFRLPGLDRMRDRIPLAITDVRSVGRDLRITA
RPEPTASAPS
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggcgcgcgccattcagctcgccgagctcgggcgtttcacgaccgaccccaatccgcgt
gtcggctgtgtgatcgtgcgcgacggtcgcatcgtcggcgagggactgcatcggcgggcc
ggcgagccgcatgccgagcgtcatgccttgaccgaggcgggcgagcgcgcccgcgaagcg
actgcctacgtcacgctggagccctgttgtcatcaaggccgcacgcccccctgtacagac
ggcctgctggaggccggggtcgcgcgggtcgtctgcgcgatggtcgacccgaatccgctg
gttgcggggcgcggtctgcgattgctcgccgaggccggcgtcgcggtcgagaccggcctg
cttgaggccgaggcgcgcgcgctcaacccgggtttcatcaagcggatggagcagggccgc
ccccacgtccgatgcaagctcgcggcgagcctggacgggcgtacggcgatggcgagtggc
gagagtcaatggattaccagcgaggcggcgcgccgcgacgttcagcgtcttcgcgccggc
agctcggcgatcctcaccgggatcggaacgctgcttgcggacgatccgagtttgaacgta
aggctcggcacggaggatttgccggggatgggtccgggcgagacgattcgccagcccctg
cgggttgtcctcgacagccgctggcgcaccccgcccggtgcccgcatcctgaccctggcc
gggacgaccctaatcgtcggcgcggtcgacgaccccgggcggatggcagagctgaagggc
gcaggtgtcgaggtgtatttgtgcccgggagactcggcgcaggtcgatctcggtgcactt
ctgagtgagctgggtcggcgcgagatcaacgaggtgctcctggagagcgggccgaccctc
gccggggctgccgtcgcggcaggtctggtcgacgagattctgatctacctggctccgcac
ctgatgggcgacgctggacgcggtctgtttcgcctgcccggactcgatcggatgcgcgat
cgcatcccgcttgcgatcaccgatgtgcgctccgtcgggcgagatcttcgtatcacggcc
cgccctgagccgaccgccagcgcgccgagttag

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