Thiocapsa bogorovii: LT988_04545
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Entry
LT988_04545 CDS
T07840
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tbog03009
]
LT988_04545 (rimO)
Enzymes [BR:
tbog01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LT988_04545 (rimO)
Ribosome biogenesis [BR:
tbog03009
]
Prokaryotic type
ribosomal protein modification factors
LT988_04545 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
UHD17324
LinkDB
All DBs
Position
complement(991903..993228)
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AA seq
441 aa
AA seq
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MSMTQTPKIGFVSLGCPKATVDSERILTQLRAEGYGIPPSYEDADLIIVNTCGFIDDAVE
ESLGAIGEALSANGRVIVTGCLGARAELIREAHPEVLAVTGPHALDEVMAAVHVQLPAPH
DPFVSLVPPQGVRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLTSRPIGEVLAEAERLV
ESGVRELLIISQDTSAYGLDLRYRPDFWNGRPLKTDTVNLARALGVLPAWVRLHYVYPYP
HVDALIPLMAEGLILPYLDMPLQHGSELILRAMRRPAATEKVLDRLSRWREQCPELVMRS
TFIVGFPGETEAEFEELLDFLRAAQLDRVGCFPYSPVEGATANALPDPVPEPVKHERVER
FMAVQAEISRAKLAERVGQRLTVLIDEVGEDEVIARSYADAPEIDGEVIIAGAWELDPGD
FIEVEVTDAGDHDLWAQPVTD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacccaaacccccaagatcggattcgtcagcctcggctgtcccaaggcgacg
gtggattcggagcggatcctcacgcagctgcgtgcggagggctacggcatcccgccgagc
tacgaggatgccgatctgatcatcgtcaacacctgcggctttatcgacgacgcggtcgag
gagtcgctcggtgcgatcggcgaggcgttgagcgcgaacggtcgtgtcatcgtgaccggg
tgcctgggtgcgcgtgcagagctgatccgcgaagctcatccggaagtccttgcggtcacg
ggcccgcacgcactcgacgaggtgatggcggccgttcatgtgcagctgccggcgccgcat
gatcccttcgtcagtttggtgccgccgcaaggggtgaggctgacgccgcgccattatgcc
tatctcaagatctccgagggctgcaaccatcggtgcagcttctgcatcatcccaagcctg
cgcggcgatctgacaagccgcccgatcggcgaggtgctcgcggaggccgagcggctggtg
gagtcgggggtgcgcgagctcttgatcatctcccaagacaccagtgcctacgggttggat
ctgcgctatcggcccgatttctggaatggccggccgctcaagaccgacaccgtcaacctg
gcgcgcgcactcggcgtgctgccggcctgggtccggctgcactacgtctatccctatccg
cacgtggacgcgctgatcccgttgatggcggaggggctgatcctgccctatctcgacatg
cctcttcagcacggcagcgagttgattctgcgtgcaatgcgtcgtccggcggcgaccgag
aaggtgctcgatcggctctcgcgctggcgcgagcagtgtccggagctggtcatgcgcagc
accttcatcgtcggttttccgggcgagaccgaggccgagttcgaggagttgctcgacttc
ctgcgcgcagcccaactggaccgcgtgggttgtttcccctattcgccggtcgagggtgcg
acggccaacgcgctgccggaccctgtcccggagccggtcaagcacgagcgggtcgagcgc
ttcatggccgtgcaagccgagatcagtcgggcgaagctcgccgagcgagtcggccaacgg
ctgaccgtgctgatcgacgaggtcggggaagacgaggtcatcgctcgcagctatgcggac
gcgcccgagatcgacggcgaggtcatcatcgcgggtgcctgggagctggatccgggggat
tttatcgaggtcgaggtcacggacgcgggtgatcacgatctgtgggcacagccggtcacc
gattaa
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