KEGG   Trypanosoma brucei brucei: Tb10.389.0110
Entry
Tb10.389.0110     CDS       T01013                                 
Name
(RefSeq) DNA-directed RNA polymerases II subunit, putative
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tbr  Trypanosoma brucei brucei
Pathway
tbr03020  RNA polymerase
tbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tb10.389.0110
  09124 Replication and repair
   03420 Nucleotide excision repair
    Tb10.389.0110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tbr03021]
    Tb10.389.0110
   03400 DNA repair and recombination proteins [BR:tbr03400]
    Tb10.389.0110
Transcription machinery [BR:tbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Tb10.389.0110
  RNA polymerase III system
   RNA polymerase III
     Tb10.389.0110
  RNA polymerase I system
   RNA polymerase I
     Tb10.389.0110
DNA repair and recombination proteins [BR:tbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Tb10.389.0110
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 3662949
NCBI-ProteinID: XP_827817
UniProt: Q388R5
LinkDB
Position
10:complement(3179511..3180170)
AA seq 219 aa
MSSESYAIGQEELVYDRMFRVMRTVGEMMRDRKYQVPSSIIPETVGQFCEQYVDREGRRI
YRERMTVPCERVGGTHRSRAMVFFASELGMEGMKGYCQTAMDANCERVIIVTHGKVNATV
KRYVDCINRSGTGQKVQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLEAHSLELNMLP
RILSTDPVAAYLGLERGRVVRIERKSVSAGFYVTYRQVV
NT seq 660 nt   +upstreamnt  +downstreamnt
atgagcagtgaaagctacgccatcggccaagaggagcttgtctatgatcgtatgtttcgg
gtgatgaggacggtgggggagatgatgagggaccggaagtatcaagtcccgagcagcatc
atcccggagacggttggacagttctgtgagcaatatgtagacagagaggggaggaggatt
taccgtgagcgcatgacggtaccgtgtgaacgtgtcggtggcacgcaccgcagtcgggcc
atggtgttctttgcttctgaactaggaatggaggggatgaaggggtactgccaaacagca
atggatgcgaattgcgaacgcgtaatcatcgtaacacatgggaaggtaaatgctacagtt
aagcgttatgtggattgcatcaaccgtagcggcactggtcaaaaggttcagctgttcgac
gaggatgaccttgtggtgaatatcactcatcacgaattggtacccaaacatacacagcta
gaggacgaggaggtcaaggagatgcttgaggctcattcattggagctaaacatgctacca
cgtattctctcaactgatcctgtggcagcttacttggggctggagcgcggtcgtgtcgta
cgaatcgagcggaagagcgtatcggccggtttctacgttacgtaccgacaggtagtgtag

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