Trypanosoma brucei brucei: Tb927.3.5500
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Entry
Tb927.3.5500 CDS
T01013
Name
(RefSeq) DNA-directed RNA polymerase II subunit 3, putative
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tbr
Trypanosoma brucei brucei
Pathway
tbr03020
RNA polymerase
tbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tb927.3.5500
09124 Replication and repair
03420 Nucleotide excision repair
Tb927.3.5500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbr03021
]
Tb927.3.5500
03400 DNA repair and recombination proteins [BR:
tbr03400
]
Tb927.3.5500
Transcription machinery [BR:
tbr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Tb927.3.5500
DNA repair and recombination proteins [BR:
tbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Tb927.3.5500
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GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
3656493
NCBI-ProteinID:
XP_844140
UniProt:
Q580S5
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All DBs
Position
3:1538252..1539265
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AA seq
337 aa
AA seq
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MKVTIVDCKRHEHSAGETLVFKLNEVDNSFANGLRRVLLAEVPVLGVESVTIIQNTSVLP
DEMIAHRIGLVPLYSKRAKQMQFFHDCLCGGTGCIECQITGELKVRCPSNQHSLQVFADS
LKIDDEGVYPVSSEERGVWLLTLGRSQEINLRVLIRKSIAKTHAKFMPVSTVSMRYEPEV
ILNKDVISSLDPEQLRQWMRSCVHRPHSIAESNGEGHTGHIDVNKLCEECLLKEPSVVSF
TEPLVFARPKKDARGHYNFTFTVETTGVLPVLQLIRDAVDVLRRKLQRVHECLTERVVPG
DLVETRPIGDAPTAPVVVNEDIMDTKGAEDDLKFVMN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacgattgtagactgcaagagacatgagcactcagctggggaaacgttggtg
tttaaactaaacgaagtcgacaattcatttgccaacggactccgacgcgtgcttctggca
gaggttccagtactcggagtggaatctgtgaccataattcaaaacacatcggtccttcct
gatgaaatgattgcgcaccgaatcggccttgtgcccctttactctaagagggcaaaacag
atgcagttttttcacgactgcctgtgcggtgggactggttgtattgaatgtcaaataaca
ggagagttgaaggttcgttgcccttcaaaccaacacagtttgcaagttttcgcagattct
cttaaaattgacgacgaaggggtttaccccgtgagttcagaggaacgtggtgtttggttg
ttaacgttgggtcgctcgcaggaaattaacctccgcgtgctaatccgaaaaagtattgcc
aaaacacacgccaagtttatgccagtttctacggtttcgatgcgctacgaaccggaggtg
atattgaataaagatgtgatttctagtcttgaccctgaacaacttcggcagtggatgcgg
tcttgtgtccatcgtccacattccattgctgagagtaatggagaagggcacacgggccac
attgacgtcaataagttatgcgaggagtgtttgttgaaggaaccgtcagttgtctccttc
actgagccacttgtcttcgcgcgtcccaagaaagatgcacgtgggcattataactttaca
ttcacagtggagactactggcgtccttcctgtacttcagttaataagagatgcggttgat
gtgctgcgtcgtaaactccagcgcgtgcacgaatgtctcactgagagggttgttcccgga
gatttagtggaaacccgacctattggtgatgcaccaactgcacccgttgtggtgaatgaa
gacattatggacaccaaaggcgcggaggacgatctcaagttcgtgatgaattga
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