Thermococcus barossii: A3L01_08415
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Entry
A3L01_08415 CDS
T05081
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tbs
Thermococcus barossii
Brite
KEGG Orthology (KO) [BR:
tbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbs03016
]
A3L01_08415
Enzymes [BR:
tbs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
A3L01_08415
Transfer RNA biogenesis [BR:
tbs03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
A3L01_08415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PabTrmU54_TRAM_dom
Met_10
MTS
Methyltransf_31
Methyltransf_25
Cons_hypoth95
Methyltransf_15
PrmA
Methyltransf_23
TehB
Motif
Other DBs
NCBI-ProteinID:
ASJ05811
UniProt:
A0A2Z2MU42
LinkDB
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Position
complement(1546248..1547501)
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AA seq
417 aa
AA seq
DB search
MRGVVEGLDMEGLGVVRLGRREIHVPFTAPGDVVEVRKWRRKKRRLIATDFDVVEPSPNR
TEPGCPYFGTCGGCLLQHLPYGEQVRFKSDKLREILGFDVEVIPSPKIYGHRNRIDVVVS
TAGIGFRRRGTWWDAVDIEWCPVFGESSRRVLKSLREFIEDHTPTLYEIRKNKGFLRYIV
IREGKFTGELMINLVTSEGKLPEDFPEYFDYADSIYWSVNRTPSDVSYGDVERFWKGEFI
RERLDDVTYLIHPNSFFQTNSYQAVNLVRKVAGLVDGERILDLYSGVGTFGIYLAKRGFS
VEGIEANPFAVEMANRNAELNGVEATFRVGEDRDVENLSKYETVIVDPPRAGLHPKLIKK
ILKDKPQSIVYVSCNPKTLRDNLDTLSEGYAVETVVGLDMFPHTPHVETVVKLKLKV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagtggtagaaggactcgatatggaaggcctgggcgtggtgaggctcgggagg
agggaaatccacgttccgttcaccgcaccgggtgacgtagtggaagttaggaaatggcgg
aggaagaagagacggctcatagccaccgattttgacgtcgtggaaccctccccaaaccgg
accgagccgggttgtccctacttcggaacgtgcggtggctgtctccttcagcaccttcca
tacggggagcaggtcagatttaaatccgacaaattgagggagattttaggatttgacgtc
gaagttattccgtccccgaagatatacggtcacagaaaccgcattgacgttgtcgtttcg
acagcggggattggattcaggaggcgcggcacttggtgggacgcggttgacatcgagtgg
tgtcccgtttttggtgaatccagcaggagggttctcaagtccttgagagagtttatagaa
gaccacacacccactctgtatgagatacggaagaacaaggggttcctgcgctacatcgtc
atccgcgagggcaagttcacaggtgagctgatgatcaatctggtcacctccgaggggaag
ctccccgaggactttcccgagtacttcgactacgccgattccatctactggagcgtcaac
aggacgccgagtgacgtctcctacggcgacgttgagaggttctggaagggagagttcata
agggagcgcctcgacgatgtcacctacctgatccaccccaacagcttcttccagacgaac
agctatcaggcggttaacctggttaggaaggtggcggggctagtggatggggagaggatt
ctcgacctctactccggcgttgggacgtttggcatttacttggcgaagaggggtttttcg
gttgagggcatcgaggcgaaccccttcgcggtggagatggccaatcggaacgccgagctg
aacggcgttgaggcaaccttccgtgtcggtgaggatagggacgtcgaaaatctttcgaaa
tacgagacggtaatcgttgatccgccaagggcggggttgcatcccaaactgataaagaaa
atcttaaaagacaaaccgcaaagcatcgtttacgtctcctgcaatccaaagactctccgg
gacaatctagacactttatcggagggatacgcggtagagaccgtcgttgggcttgacatg
ttcccgcatacgcctcacgtggagacggttgtcaaacttaaactcaaggtttaa
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