Trinickia caryophylli: U0034_04160
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Entry
U0034_04160 CDS
T09722
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00230
Purine metabolism
tcar01100
Metabolic pathways
tcar01120
Microbial metabolism in diverse environments
tcar01232
Nucleotide metabolism
Module
tcar_M00958
Adenine ribonucleotide degradation, AMP => Urate
tcar_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
U0034_04160 (xdhB)
Enzymes [BR:
tcar01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
U0034_04160 (xdhB)
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF745
Motif
Other DBs
NCBI-ProteinID:
WQE12615
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All DBs
Position
1:926154..928550
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AA seq
798 aa
AA seq
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MSSRTDGKTAIGVALPHESAELHVSGEAAYTDDLPELAGTLHVALGLSRHAHARIVSLDL
DAVRAAHGVVAVLTAGDIPGENNCGPVVHDDPVLADELVSYLGQPIFAVVATSRESARRA
AALAKSDDVVRYEPLEAVLSAADARDRRQYVLPPLNLVRGTPAEKIAAAPRRLQGEFEVG
GQEQFYLEGQIAYAVPKEGASLLVYSSTQHPSEMQQVVAHMLGWPAHRVVCECRRMGGGF
GGKESQSAVFACVAALAAHKLNRPVKLRADRDDDFMITGKRHDAVYRYEVGFDDDGRLLG
LRIEIALRAGYSADLSGAVATRAVCHVDNAYYLSDIEIAALCCKTNTQSNTAFRGFGGPQ
GALVTEVVIDAVARVLGRDPLDVRLANYYGVGERDVTPYGQRVEDNVLAPLTAELLATSD
YRARRDEIARFNAASPVLKRGIALTPVKFGISFNVPFLNQAGALVHVYRDGSVLVNHGGT
EMGQGLNTKVAQVVAHTLGLPLSQVRVTATDTSKIANTSATAASTGSDLNGKAAEAAART
IRERLAELACARLGGEAGDVHEVRFADATVSVNGASMPFAELVNAAYLSRVQLWSDGFYA
TPKVHWDAKTLTGHPFYYFAYGAAVSEVVVDTLTGEWRLVRADLLHDVGQSINPAIDIGQ
IEGGFIQGMGWLTTEELWWSNDGRLMTHAPSTYKIPAVSDTPAAFNVALYRNQNTEPTVF
RSKAVGEPPLLLGFSVFLAIRDAVAATRPEARRAPQLRAPATPEAIVDAIEALHASGAPT
PANRGTNDAAAERVAGTA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgcaccgatggcaagaccgcgatcggcgtcgcgctgccgcacgaatccgcc
gagctgcacgtaagcggcgaagcggcctataccgacgatctgccggagttggccggcacg
ctgcacgtcgcgctcggcctgtcgcgtcatgcgcatgcccgcatcgtctcgctcgacctc
gacgcggtacgtgcggcgcacggcgtcgtcgcagtgttgaccgccggcgacattcccggg
gagaacaactgcggcccggtggtacacgacgatcctgtcctggccgatgagctcgtctcg
tacctcgggcaaccgatattcgccgtcgtggcgacgagccgcgaatcggcgcggcgggcc
gccgcactcgcgaagagcgacgacgtcgtacgctacgagccgctcgaagccgtgctgagc
gccgccgatgcgcgcgaccggcggcagtacgtcctgccgccgctcaatctcgtacgcggc
acgccggccgaaaagatcgccgcggcgccgcgtcgcctgcagggcgaattcgaggtcgga
ggccaggaacagttctatctcgaagggcagatcgcttatgcggttcccaaagaaggtgcg
agcctgctcgtctacagctccacgcagcatccgagcgaaatgcagcaggtggtcgcgcac
atgctcggctggcctgcgcatcgcgtcgtctgcgagtgccggcgcatgggcggcggcttc
ggcggcaaggagtcgcagtcggcggtcttcgcctgtgtggcggcactcgcggcacacaag
ctgaaccggcccgtcaaactgcgggccgaccgcgacgacgacttcatgatcacgggcaag
cggcatgatgccgtctatcgttacgaggtcggcttcgacgacgatgggcgcctgctcggc
ctgcgcatcgagattgccttgcgcgcgggctattcggcggacctgtcgggcgccgttgcc
acacgcgcagtctgtcatgtcgacaacgcctattacctctccgacatcgaaatcgcggca
ctgtgctgcaaaacgaacacgcaatcgaatacggcgtttcgcggctttggcggcccccag
ggcgcgctcgtcaccgaggtggtcatcgacgccgtggcgcgcgtgctcggacgcgatccg
ctcgacgtacgtctcgcgaactactacggcgtcggcgagcgcgacgtgacgccctacggc
cagcgcgtggaagataacgtgctcgcgccgctcacggccgagctgctggcgacgagcgat
taccgcgcgcgccgcgacgagatcgcccgcttcaatgcggcgagccccgtgctcaaacga
ggcatcgcactgacgcccgtcaagttcggcatctcgttcaacgtgccctttctcaatcag
gccggcgcgctcgtacacgtctatcgcgacggctctgtgctcgtcaatcacggcggcacc
gaaatgggccaggggctcaacacgaaagtggcacaagtcgtcgcccacacgctcggcttg
ccgctgtcacaggtgcgcgtcaccgccaccgatacgtcgaagatcgccaacacttccgct
acggccgcctccacgggcagcgacctgaacggcaaagccgccgaagcggccgcgcgcacg
attcgcgagcggctcgccgagctcgcctgcgcccgcctgggcggcgaggccggcgacgtt
cacgaggtgcgtttcgccgacgccacggtatccgtgaacggggcgtcgatgccgttcgcc
gagctcgtcaacgccgcgtatctctcgcgcgtgcagctttggtcggacggtttttacgcc
acccccaaagtccactgggatgccaagacgctcacgggccacccgttctattacttcgcg
tatggcgccgcagtgtcggaggtcgtcgtggatacgctcaccggcgaatggcggctcgtg
cgcgccgacctcctgcacgacgtcggccaatcgatcaatccggccatcgacatcggccag
atcgagggcggcttcattcagggcatgggctggctcacgaccgaggagctctggtggtcg
aacgacggccgcctgatgacacacgcaccgtcgacttacaagatccccgcggtcagcgac
accccggccgcgttcaacgtcgcgctctatcgcaatcagaataccgagccgaccgtattc
cggtcgaaagccgtcggggagcccccgcttttgctcgggttctccgtttttctcgcgatt
cgggacgccgttgcggcgactcggcccgaggccaggcgcgcgccccaactgcgcgcgccg
gctacgcccgaggccatcgtcgatgcgatcgaggcgctgcatgcgagcggcgcgcccacc
cccgctaaccgaggcacgaacgatgcggcggcagagcgcgtcgccggcacagcctga
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