Trinickia caryophylli: U0034_07335
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Entry
U0034_07335 CDS
T09722
Name
(GenBank) AMP-binding protein
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00470
D-Amino acid metabolism
tcar00552
Teichoic acid biosynthesis
tcar01100
Metabolic pathways
tcar01503
Cationic antimicrobial peptide (CAMP) resistance
tcar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0034_07335
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
U0034_07335
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0034_07335
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
U0034_07335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
tcar01504
]
U0034_07335
Enzymes [BR:
tcar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
U0034_07335
Antimicrobial resistance genes [BR:
tcar01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
U0034_07335
BRITE hierarchy
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WQE13187
LinkDB
All DBs
Position
1:complement(1617906..1619381)
Genome browser
AA seq
491 aa
AA seq
DB search
MHFDFERFEFVDSQTAQERVAVVGPSASMRWSSLRTAVRQWADDAQRAGVRRDVPLVITG
HKEPAFLVAMLGCLASGVPFVPVDVINPAERVARITELVRAGLRYDAQARAFVDTGVRAA
PLAEKDVAYVMFTSGSTGDPKGVQIGRESLTLFAAWIRDCLALGDAPVFMDQMLFSFDFS
LFNWVGALATGGVCALCPREAIADRAAFADYLARAKVSIWACTPSFVRQQLLDPAFDRAH
LPDLRVFVFGAESLTPAVAEALWARFPDARIVNSYGPTEATCSTTWVEIDPALRAAAPSP
FPIGRAKPYADVFIDDGEICIAGNHVMRGYLNRADLNDTRMFVRGGKRGYRTGDLGHIDE
NGLVTFRGRRDDQIKLHGYRIELAEIDVALAALPGVRAGAAVALRRADGQAVRIVGFVDP
DEPGPPGLLPPPPSLAGWRAELGRRLPSYMVPSELIVCHGFPLTQTDKADRPQLARMYLA
ARLRSSSEPVQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgatttcgagcgcttcgaattcgtcgattcgcagacggcgcaggagcgcgtc
gcggtcgtcggcccgtcggcgtccatgcgctggtcctcgctgcgcacggctgtgcggcag
tgggccgacgacgcgcaacgtgcgggcgtgcggcgcgatgtccccctcgtcatcacgggg
cacaaggagcccgcttttctcgtggccatgttgggctgcctcgcgagcggtgtgccgttc
gtgcctgtcgacgtcatcaatccggccgagcgcgtggcgcgcattaccgagctcgtgcgc
gcgggactgcgctacgacgcgcaggcccgagccttcgtcgacaccggggtgagggccgca
ccgcttgcggagaaggacgttgcctacgtcatgttcacgtcgggcagcacgggagatccg
aaaggcgtgcagatcgggcgcgagagtctcaccctctttgccgcatggattcgcgattgc
ctcgcattgggcgatgcgcccgtcttcatggaccagatgctgttcagcttcgacttctcg
ctcttcaattgggtcggtgcgttggcaacgggtggtgtctgtgcgctgtgcccgcgtgag
gcgatcgcggaccgcgcggccttcgccgactatctcgcccgtgcgaaggtgagtatctgg
gcctgcacgccgtcgttcgtgcgtcagcaattgctcgatccggcattcgaccgcgcgcat
ctgcccgatttgcgcgtattcgtgttcggtgccgaatcgttgacgcccgctgtggccgaa
gcgctctgggcccggtttcccgatgcccgcatcgtcaattcgtacggtccgaccgaggca
acgtgttccaccacgtgggtcgagatcgatccggcgctgcgggcggccgcgccttcgccg
tttccgatcggcagggcgaagccctatgccgacgtcttcatcgacgacggcgaaatatgt
atcgcgggcaaccatgtcatgcgcgggtacttgaaccgggccgatctgaacgacacgcgc
atgttcgtgcgcggcggcaagcgcggctaccgcaccggcgatctggggcacattgacgaa
aacgggctcgtcacgttcagagggcgtcgcgacgatcagatcaaattgcacggataccgg
atcgagctggcggaaatcgatgtcgcgctcgcggcgttgcccggcgtgcgcgccggtgcg
gccgttgcgctgcggcgagccgatgggcaggccgtacgtatcgtcggtttcgtcgatccc
gacgagcccggcccgcccgggcttttgccgccgccgccgtcgcttgcgggctggcgcgcc
gagcttgggcgccggctgccgtcgtacatggttccatccgagctgatcgtctgccacggc
tttccgctcacccaaaccgacaaggccgaccgtccgcaactggcgcggatgtatctggcc
gcccgcctgcgttcttcttcggagcccgtccaatga
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