Theobroma cacao (cacao): 18587075
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Entry
18587075 CDS
T02994
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
18587075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18587075
Enzymes [BR:
tcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
18587075
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
18587075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18587075
NCBI-ProteinID:
XP_017985035
LinkDB
All DBs
Position
10:17819995..17847209
Genome browser
AA seq
1158 aa
AA seq
DB search
MGLKQEDLLLNNNTNNSNVSEMPVDKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSF
NYFVNTGIKKIVRANDRIVSGVDPSIYLRFKDVRIGEPSMTINAVSEKINPHTCRLSDMT
YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD
PGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY
LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL
EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI
LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ
FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR
KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL
ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV
YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI
ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC
RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNAIVAVMSYSGYDIEDAIVMNKSSLD
RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI
YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL
IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMV
ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ
AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL
IQELQSMNIVPRLKLSEA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcaagcaagaagatttacttctcaataacaacaccaataattcaaatgtttct
gagatgcccgttgataagcaaaagcttgctgctccaataaaatcagctgttgataagttt
cagctgctacctgagtttttaaaggttagaggattagtgaagcaacacttggattcattt
aactattttgttaatactggaataaagaagattgtccgtgccaatgaccggattgtatcc
ggtgttgaccccagtatttacctcaggtttaaagatgttagaattggtgagccctccatg
acgatcaatgcagtcagtgaaaaaataaatccccatacatgccggttgtcagacatgacg
tatgctgcaccgatatttgtcaatatagagtacattcaagggagtcatgggcagaaaact
agactggaaaagaatgatcttgttattggaagaatgcctatcatgttaaggagttgttgc
tgtgtgttatatggaaaagacgaagctgaacttgcgaggcttggtgagtgcccccttgat
cctggaggatactttgtcattaaaggagcagagaaggtgattttaatacaggaacagctt
tccaagaatagaataatcattgatgcagacaagaagggaaatataaatgcatctgtgaca
agcagttcagaggcaacaaaaagcaaaacagttattcagatggagaaagaaaagatatat
ttacttctcaatcaatttgtgaaaaagatccctattatggtggtcatgaaggcaatgggg
atggagagtgatcaagaggttgtgcagatggttggtagagatcctcattataatgccgtt
cttttgccttctatagaggaatgtgcaggagttggcatttatactcaggaacaagcactg
gagtacctagagacgaaggtgaaaagagttatgtacactggtcctgcatctgagaaggaa
ggaagagctctgtctatccttcgagatgtatttcttgccaacgttccagtgcgttctaat
aattttcgtccaaaatgtttgtatgttgcggtaatgctgagaaggatggtggaggcaatt
ttaaataaggatgcgatggatgacaaggattatgtggggaacaagcgtctagagctatca
ggacaattaatctctctgctttttgaggatttgttcaagacaacgattagcgaagtgcag
aagatgattgatctcgtgttatcaaagcccagcagatctagtgctttggacccttctcag
tttttacgtagtagagagaccattacgtttgggctagaaaggaccctttctactggtaac
ttcgatataaagcgtttcaaaatgcacagaaaaggcatgacacaggtgctagcaaggtta
tcctttattgggactttgggctatatgacaaaagtctcaccacagtttgagaagtctcgg
aaagtaagtggaccgagggccttgcaacctagccagtggggaatgctttgcccttgtgat
actcctgaaggtgaagcttgtggactggttaaaaacttagcactaatgactcatgttaca
actgatgaggatgagggtcctttgatttctctgtgctattgcttgggcgttgaagacttg
gagctactatctggggaagagcttcatacaccaaattctttcctagttatattaaatggg
ctcattcttggcaaacatagacggccacagcattttgctgtggctatgagaaagctgcgg
agagctggcaaagttggtgagtttgtgagtgtcttcgtaaatgagaagcagcgttgtgtt
tacattgcttctgatggaggtcgagtgtgtcgaccgttggtaatagctgacaagggagta
tcaaggatcaaagaacaccatatgaaggagttattggatggagtccgcacttttgatgac
tttttacgtgatggattgattgaatatcttgatgtcaatgaggagaacaatgctctgatt
gctttatatgaaggagaggctacacctgaaacaacccatatcgagatagagcctttcacg
atcttaggtgtttgtgctgggcttattccatatcctcatcataatcagtcaccaagaaat
acctatcagtgtgcaatggggaagcaagcaatgggaaatattgcatataaccagttgtgc
cggatggacacattactatatctattggtgtatcctcagcggcctttattgacaacgagg
acaattgaactggttggatatgataagcttggagctggtcagaatgcgattgttgctgtg
atgagttatagtgggtatgacatagaggacgcaattgtcatgaacaagtcttctctagac
cgtggttttggtcgttgtattgtgatgaaaaggtattctgccgttaatcaaaaatatgaa
actggtgcatctgatagaatacttaggccacagagaacaggacctggttcagaaaggatg
cagatattagatgatgatggaattgctactcctggggagattattagaccaaatgatatc
tacattaataaggagtcctctattcatacaagaggatctcgtgtatcttcagaatctcta
cctgatagcgcatatagacctgctaggcaaacatacaaaggtcctgaaggagagtcttgt
gtggtggatagagttgctctttgcactgataggaacagcaatctatctattaaattttta
atacgccatacacgtcgacctgaggttggtgacaaatttagtagcagacatggccagaaa
ggtgtttgtggcactatcattcagcaggaagatttcccattttctgagcgtggcatttgt
cctgatttaattatgaatcctcatggttttccaagtcgaatgactgtaggtaagatggta
gagcttcttggaggcaaagctggagtatcatgtggtaggttccattatggtagtgccttt
ggggagcctagtggtcatgcggatagggttgaagctataagtgaaaccctcatcaagcat
ggttttagctacaatggcaaggacttcatttattcaggtattacaggttgtccactgcaa
gcatatatttttatgggaccaatttactaccagaagttgaagcatatggtccttgacaaa
atgcatgccagaggtaatgggcctcgagttatgctaactagacagcctacagaagggaga
gctcgaaatggagggttacgagtaggagaaatggaacgtgattgtctaattgcttatggt
gctagcatgttgattttcgagcgcctgatgatttccagtgatccttttgaagttcaggtt
tgcagaaaatgtggtttgttaggatactacagccataagctgaaaactgggatttgttct
tcatgtaaaaatggcgataatgtttctactatgaagctaccatacgcatgcaagcttttg
atccaggaactccagtcaatgaacattgtgccacgtttgaaactatcagaggcttga
DBGET
integrated database retrieval system
