KEGG   Theobroma cacao (cacao): 18606036
Entry
18606036          CDS       T02994                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa49
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    18606036
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcc03021]
    18606036
Transcription machinery [BR:tcc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     18606036
SSDB
Motif
Pfam: RNA_pol_I_A49 DDE_Tnp_4 DUF3732 EloA-BP1
Other DBs
NCBI-GeneID: 18606036
NCBI-ProteinID: XP_007039490
LinkDB
Position
3:31331760..31334344
AA seq 457 aa
MEEQEPPSTKSRSKKSKKRNREGKLQQPIEPMSQNLGAKKENFQVKIQLFQDQPNKIPPL
VAYFPSGYNPCKTDPQTRQEEEEEEEEEEGPDNKSNQPRVKVYRNMAQRKTNRLQVVVSP
SGSNVDFVGSNYSGEAAAAQVCKYSLGVLDRETRTLKIIPIASNKIFRLEPRVRSSETAN
KDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLKKEVDPESQKSLDEKIEQ
VAFNKEALGNTSALVARNIPPHDCSATTPVEAYPLDKIILKGDWEFLGDIYGLLEVGAEV
ASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKFNDQFSMDRVASAKGHKIPS
IIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFRTDPSDIAKDLRMSSIGLRP
HFENLGCKLVRENNSIFTTLPVPLKFPSENLKRQRKR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggaagaacaagaaccaccatcgacgaaatcgagaagcaagaagtccaagaagagaaac
agagaggggaagctccaacaaccaatagaaccgatgtcacaaaaccttggagcaaaaaag
gagaatttccaagtcaaaatccaacttttccaagaccaaccaaacaagattccaccttta
gttgcctatttcccgtctggctacaatccttgcaaaaccgatccacaaacccgacaggag
gaggaagaggaggaagaagaagaagaaggacccgacaacaaaagcaaccaaccaagggtc
aaggtttatagaaacatggctcaaaggaagactaataggctgcaagttgtggttagccca
agtgggtctaatgtggattttgtgggctccaattacagtggtgaggcagctgctgcacaa
gtttgcaagtactcacttggtgttcttgatagggagaccaggactctcaagattattcct
attgcttctaataagatatttagattggaaccaagagttagaagctcagagactgctaat
aaggatgtttcaagttcagttaagagtgaactcactacagaagacaaggaggacaaaatg
ggggagcttactgcactctatggaacaaagaaggatagaaagaagaggaaggatcttaat
aatttgaagaaggaagttgatcctgaatcacaaaaatctttagacgagaagattgagcaa
gttgcctttaacaaggaggctctgggaaataccagtgcccttgttgctcgtaatatccct
cctcatgactgttctgctactacacccgtagaagcttacccattggacaagattattctc
aagggagactgggaatttcttggagatatttatgggcttttggaggtgggagcagaagta
gcaagcaatgcttatccaacttttgtttgcaacagaattaataaattggaaggcattcag
gatgagacagagaagaggaaactctcgtgtgttttttcatttatcactcatcttgtgaag
ttcaacgatcagttctccatggatcgtgttgcttctgcaaagggccataagatcccaagc
attatacgccagaggtttttcaccatgtttactgatccagggttgagaaaaccttcccgt
gaccaaattaaccttctgattagttacgtcttggtgctcactttacatgctgatggattc
cgaactgacccatcagatatagcgaaggatctaagaatgagttcaataggtttgagacct
cattttgagaatttggggtgcaaacttgtacgtgagaacaactcaatattcactaccctt
cctgttcctctaaaatttccttcggagaacttgaagcggcagcggaaacggtag

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