Tigriopus californicus (tidepool copepod): 131877217
Help
Entry
131877217 CDS
T09700
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131877217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcf03021
]
131877217
Enzymes [BR:
tcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131877217
Transcription machinery [BR:
tcf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131877217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
131877217
NCBI-ProteinID:
XP_059078807
LinkDB
All DBs
Position
2:complement(8073941..8083624)
Genome browser
AA seq
1229 aa
AA seq
DB search
MVGLITYEPPIIVTLSQMSTRAHVSPALRDKIVPFSGSPACPRLSFNLSLRATSPLLFDR
FGALGSSMAPNQDDPASPWAYPREPSLKNLTSPEWGRPRPRANPATQSLGQPHVESFNFM
MGPGLDLVVQDLKPLLFRVPQTEERIALRITEAHLMAPSVVPGSIGVKEPRVFPTEARQR
GITYKGRLNIRCAYSVNGIEQPPFEKSLGQIPIMLRSNACNLAGLSPAELVAHGEHEEEW
GGYFIVGGHERIIRMLQTTRRNYPIAMQRPSWKKRGRNFSDLGVLLECGKSDLTTNKNVL
HFVTSGTSKFMFNFGKELFFVPVVMILKCLCTRSDASIYQALIAGTEEDDFYYRGCLKNM
LAEPQEEGLFSSEQVRQYIGRVFRDKMSYIMPDWYTDEEACDFLIDRAICIHLNNNEDKF
NMIVLMVKKLFALVQDKCVVEGVDSVMMHEIVVGGHLYLQLIKEKLEMWMTSLKANILKR
TRGARGNPEVNPEAIQLCANRTITLEKMFENFLGTGNLPSQSGLGLMQDSGLTIMAENIN
RMRYMSHFRAIHRGSFFQEMRTTEVRALLPDAWGFVCPVHTPDGAPCGLLNHLTMPAEIV
THVPDASKIPQVLVNLGMHPLGEVPEKVMKSCYHVVLNGKVLGFVARSHAQRIADKLRVL
KIQGDRVPKVTEIVLIAAKSRAAQFPGMFIFTGAARMMRPVLNLSVNEIELIGTFEQVFM
DICITQDEAYKGLTTHQEIRATSFLSNLACTIPLPDFNQSPRNMYQCQMGKQTMASPMHT
WHLNSETKMYRLQTPSSPFFRPAHYDHIKLDDFPMGTNAIVAVISYTGYDMEDAMIINKS
SFERGFAAGSIYKSMFVDLREQATGRKNSQADCVPLLFARDPKNETLGKFLDLDGLPHIG
VPLHEGDPLYSYCNTTEGTYVVKRYEGKEMVFVDAVKICSNDTGTSERNRICISLRIPRN
PSVGDKFASRAGQKGICSQKWPTEDLPWTESGLFPDIVFNPHGFPSRMTIAMMIECMAGK
SGAVHGLCHDATPFVFGETSHGRVDAIDFFARQLEKAGYNYYGTETLYSGTDGVEMKADI
FFGIIHYQRLRHMVSDKFQVRSVGTIDQVTRQPIKGRRRGGGVRFGEMERDSLLSHGTMF
LLQDRLFHGSDKARVKICTECGSLLSPRVVIPLKANSTGVSRYREHHTKCVICDRFDCVK
DIQLPYIFLHLVSQLAAVNIKIKVQTKQE
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggttggacttattacatacgagccgccaataatcgtcaccttaagtcaaatgtcaaca
agagcacatgtttctcctgcattaagggacaaaatagttccgttctccggatcgcccgct
tgtccgcgcctctcgtttaatctatctttgcgggcgacctccccccttttgttcgaccgt
ttcggggctctcggttcgagcatggcgcccaaccaggacgacccggcctcgccatgggcg
tacccgcgcgagccctcgctcaagaatttgacctcgccggaatggggtcgtccgcgcccg
cgcgctaatccggccacccaatcgctgggccagcctcacgtcgagtctttcaacttcatg
atgggcccgggcttggacttagtggtacaagatctgaagccgcttctgttccgtgtaccg
caaaccgaagagcggatcgctttgcgcattacggaagcccacttgatggcacccagtgtg
gtacccggatcgatcggcgtgaaggagccccgagtctttcccacggaggcccgacaaaga
ggcatcacctacaaaggtcgattaaacattagatgcgcttattccgtaaatgggattgaa
cagccgccctttgagaagtccttggggcagatcccgattatgttgcgctcgaacgcgtgc
aatctggctggtttaagtccggcggagctcgtggctcacggtgagcacgaggaggagtgg
ggcggatacttcattgtgggcggacacgagcgaatcatccgcatgttgcaaaccacccgc
cgcaattatcccatcgctatgcagcgaccatcgtggaagaaacgcggtcgaaacttttcc
gatctgggcgtcctattggagtgcggcaagtccgatctgaccaccaacaagaacgtgttg
cactttgtcacctcgggcacgagtaagttcatgttcaactttggcaaggagctgtttttc
gtgcccgtggtcatgatcttgaaatgtctgtgcactcgatccgatgccagtatctatcaa
gccttgatcgctggcactgaagaggacgatttctattatcgaggatgtctcaagaatatg
ttagccgaacctcaagaggagggcctattttcgagtgagcaggttcgtcaatatattggc
cgcgtgttccgcgacaagatgtcgtacatcatgccggattggtacacggatgaggaggcg
tgtgatttcctgattgaccgtgccatctgcattcatctgaacaacaatgaggacaaattc
aacatgatcgtgctcatggtgaagaagctgttcgctctcgtgcaggacaagtgcgtggta
gagggcgtggacagtgtgatgatgcacgagatcgtggtgggtgggcatctttatctgcag
ttgataaaagagaagctcgaaatgtggatgacgtccctgaaggcgaacatcttgaagcgc
actcgaggagcccgaggcaaccccgaggtcaaccctgaggccattcaattgtgcgccaat
cgaaccatcactttggagaagatgttcgaaaacttcttgggcacgggcaatctgcccagt
cagagcggtttgggcctcatgcaagattcgggcctcaccatcatggctgagaacatcaat
cggatgcgatatatgtcccatttccgggccattcatcgtggttccttcttccaagaaatg
aggaccaccgaagtccgagccctcctccctgacgcttggggattcgtttgtcccgttcac
acgcccgatggcgcaccctgtgggctcctcaatcatctgaccatgcccgccgagatcgtg
acgcacgtaccggatgcgtcgaaaataccccaagtcctggtcaatttgggcatgcatccc
ctaggggaggtgccggagaaagtgatgaagtcttgctaccacgtggtgctcaatgggaag
gtcttgggcttcgttgcccgatctcacgcccaaaggattgccgacaaactgcgtgtgctc
aagatccaaggtgatcgggtgcccaaggtgaccgagatcgtccttatcgcagctaaaagc
cgtgcggctcaattccctggcatgttcatattcacgggtgcggcgcgcatgatgcgaccc
gttctcaacttatccgtgaatgagattgagttgattggcacgttcgagcaagtcttcatg
gatatctgcatcactcaggatgaagcctacaaaggactcacgacccaccaagagatccga
gccaccagtttcttgagcaatttggcgtgcaccattccattgccggacttcaatcagtcc
cctcgtaacatgtaccagtgtcaaatgggcaagcaaaccatggcctcgcccatgcacacg
tggcatctcaattccgagaccaaaatgtatcgcctccaaacgccctcttcgcccttcttc
cgtcccgcccattatgatcacatcaaactggatgacttccccatgggcaccaacgccatc
gtcgccgtcatctcttacacaggatacgatatggaggacgccatgatcatcaacaaatcc
tcattcgaacgcgggtttgccgcaggatccatctacaaatcgatgtttgtcgacctcaga
gaacaggccactggtcggaagaacagtcaggccgattgtgtccctctgttattcgctcga
gaccccaagaacgagaccctagggaaatttctcgatttggacggcctgcctcatatcgga
gttcctctgcatgaaggtgatcccttgtatagctattgcaacacgacagaaggcacctac
gtagtcaagaggtacgaagggaaagagatggttttcgtggatgccgtcaagatttgctcc
aatgatacgggcacgagtgagcgtaatcggatttgcatcagtctcagaattccacgtaat
ccctccgtgggagacaagtttgcctctcgagctggccaaaaggggatttgcagtcaaaaa
tggcccaccgaggatttgccttggacagaaagtggcttattccccgatatcgtgtttaat
cctcacggctttccatctcggatgaccatcgccatgatgatcgagtgcatggcaggcaag
tcgggggcggttcatggactctgccacgatgccacgcctttcgtcttcggcgagaccagt
catggtcgtgtggatgccattgatttcttcgctcgccaattagagaaggccggctacaac
tattatggcacagaaacgctctactcggggacggatggggtggagatgaaggccgacatc
ttcttcggtatcattcattatcaacgcctacgtcatatggtcagtgacaaattccaagtt
cgaagcgtgggcaccatcgatcaagtgacaagacaaccaattaagggtcgacgacggggt
ggtggagttcgatttggcgagatggagcgagattcactactttcgcatggaaccatgttc
ctcctgcaagaccgtctgtttcatgggtcggataaggcacgggtgaaaatctgcaccgaa
tgcgggagtcttctgtctccgcgggttgtgatcccactcaaggccaattccacgggcgtg
tcacgatatcgggaacatcatactaagtgtgtgatctgtgatcgcttcgactgcgtcaag
gatatccaattaccttatattttcctccatctggtgtcgcaattggctgcagtaaatatc
aagatcaaggtccagaccaaacaggagtaa
DBGET
integrated database retrieval system
