Tigriopus californicus (tidepool copepod): 131886342
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Entry
131886342 CDS
T09700
Name
(RefSeq) beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf00052
Galactose metabolism
tcf00511
Other glycan degradation
tcf00531
Glycosaminoglycan degradation
tcf00600
Sphingolipid metabolism
tcf00604
Glycosphingolipid biosynthesis - ganglio series
tcf01100
Metabolic pathways
tcf04142
Lysosome
Module
tcf_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
131886342
09103 Lipid metabolism
00600 Sphingolipid metabolism
131886342
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
131886342
00604 Glycosphingolipid biosynthesis - ganglio series
131886342
00511 Other glycan degradation
131886342
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
131886342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcf04147
]
131886342
Enzymes [BR:
tcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
131886342
Exosome [BR:
tcf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
131886342
BRITE hierarchy
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Cellulase
Motif
Other DBs
NCBI-GeneID:
131886342
NCBI-ProteinID:
XP_059090617
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All DBs
Position
9:2581121..2583255
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AA seq
644 aa
AA seq
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MRWKELLFVSSCLITQISCHQTGQPNRNNRSFTIDYGMNTFVKDGVPFRYISGSIHYFRV
HPNHWEDRLKKIRSAGLNAIQVYVEWNSHEPEPGKFQFEGNQDLERFLELAHKWGLLVIL
RPGPFIDAERDFGGLPFWLLQKNKQVKLRTADPSFMKPVRSWFKVLFQKLKRLLHQNGGP
IIMVQVENEYGSYGQQTGKCDTEYISQLRDITREHLGQEVLLFATDGGGSIDSIRCSKVP
GVYSTVDFGPTEDFKDRFHHQRLFEPHGPLVNSEFYTGWLDHWGHPHSQTPSKKVNSVLD
AMLKFGANVNLYMIHGGTSFGFGAGSNFPPFQVTPTSYDYDAPISEAGDLTPKYEDLKRV
VAKYEAIPDAIQVKNSSKRAYGSIYLKPLGTIFDHVKNLTTFSMGISTNPLTFEELGQAF
GFVLYEHRLDHVTTNPVQLEIKGLHDRGYVYVNQELQGILSRSESIFTMPLIIAKGQKLQ
ILVENQGRICFGKNLNDFKGITSAVKLGNNILTNWHMRSIPVSHVSHFDTTPPSLKTKFK
SMSFWKGHIKISCPRSSPEDTFLSFQHWSKGLVFVNGFNLGRYWPRLGPQETLYLPGPLL
KCGINDVLVLEQEKTPCRFHKGSWLNCNIKSTDSPQINGQTPSV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagatggaaggaacttctgtttgtttccagttgtcttatcacgcaaatctcttgccac
caaacaggacaacctaatcgcaataatcgctccttcacaatcgactatggcatgaacact
tttgtcaaggacggtgttccatttcggtacatctcgggatccattcactacttccgtgtc
catccaaaccattgggaagatcggttgaagaaaatccgttcagctggcctcaatgccatt
caggtttatgtagaatggaacagccacgaaccagaacccgggaagttccaatttgagggt
aatcaagatctagagaggttcctggaattggcccacaaatggggattgttggtcattctc
cgacctggtccctttatcgatgccgaacgagactttggagggcttcctttctggctattg
cagaagaataagcaagtcaagttgaggaccgcggatccatcttttatgaagcccgttcga
tcttggtttaaagtgttgttccaaaaactgaagagactcttgcaccaaaatggtggtcca
attatcatggtccaagttgagaatgaatacggctcgtatggacaacagactggaaagtgc
gacactgaatacatttcccagctccgagatatcactagggaacaccttggacaggaagtg
cttcttttcgccactgatggaggcggtagcatcgattcgattcgttgttccaaagtaccg
ggagtttattccacagtcgactttggaccaactgaagatttcaaagatcgtttccaccac
caacgcttgtttgagcctcatggtccattggtgaattcagagttctacactggctggttg
gaccattggggccatccccattcccaaactccatccaagaaagtcaattccgtcttggac
gcaatgctgaagtttggtgccaatgtgaatttgtacatgatccatgggggaacatcattc
ggatttggagctggttccaatttccctccgttccaagtcacaccaacctcatacgattac
gatgctcccatttccgaggctggtgatttaacgcccaaatatgaagacctcaagagggtt
gtggccaaatatgaagccattcctgatgccattcaagtaaagaattcatcgaagcgagcc
tacgggtccatttacttgaaaccccttggaaccattttcgaccacgtcaagaaccttacc
accttctctatgggaataagtacaaacccattgacctttgaagaattgggccaagctttt
ggatttgtcttgtacgaacatcgtctggaccatgtgaccacaaatccagttcagctagaa
atcaaaggacttcacgaccgtggctatgtctacgtgaatcaagaactccaaggtatctta
tctcgatctgagtcaattttcacaatgccattaatcattgctaaaggccaaaagctgcaa
atattggtagagaatcaaggccgtatctgtttcggcaaaaatctcaatgatttcaaagga
atcacgtccgcagtcaaacttgggaataatattctaaccaactggcacatgcgatcgatc
ccagtgtctcatgtgtcacattttgataccactcctccctcgctgaagaccaaatttaag
agcatgagcttctggaaaggacatattaagatatcttgtccccgatcatctccagaagat
acctttttgagttttcagcattggagcaaaggccttgtctttgttaatggcttcaatttg
ggtcggtattggccccgtttaggcccacaagagactctatatctaccgggacccttatta
aaatgtggcattaatgacgttttggtgctggaacaagaaaagactccgtgtcgtttccac
aaaggatcttggttaaactgtaatatcaaatccaccgactctccacaaattaatggccaa
actccaagcgtataa
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