Tigriopus californicus (tidepool copepod): 131887319
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Entry
131887319 CDS
T09700
Name
(RefSeq) microphthalmia-associated transcription factor-like
KO
K09105
transcription factor E3
Organism
tcf
Tigriopus californicus (tidepool copepod)
Pathway
tcf04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
131887319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcf03000
]
131887319
Transcription factors [BR:
tcf03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
131887319
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
MITF_TFEB_C_3_N
Motif
Other DBs
NCBI-GeneID:
131887319
NCBI-ProteinID:
XP_059091881
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All DBs
Position
9:complement(8764676..8785072)
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AA seq
736 aa
AA seq
DB search
MAESITTLDLEDIRNNLPTPSFDRNHGCYFNLSKPQLDHHSHPYDSQHLGSSFYGPRQLE
EGSNFMDSNVLFAMDSATEGYDHSSNPLSVGQTSQESSRKSDSYNLDLDPELERILETDP
SCLKDIKSKSFQFGSNVNRKASEFEDTDSFAAQDLLFTPHWSSLSQETPEPPSDGFPTVP
TAKPYRSISNHHGDKIVKHPNVVESVRVRALLDQRPPSFKELTLTSRTQARQMLDRELCL
QQPGRELSSQSCQEKTSDSRPRGQASHRQNQDGEENGLSRAIPGSHSIGPHGSKSDHGTD
EVVGQVPPNVFKVQTRLQNPTKYHMQESQKRQVREYLAYSPKANANLLRPPNVNHHAFSA
PDQSVDCMETCLSRPLYGPSSAPARPCDGSDSSINNQLGQEPSSSQYSDSTQPEPATGDQ
FLDEFLSNDASLDDGAVPDIKVIDSSINMTANEVNTNTLLDFFSQLNKSPHKTNLNGTVL
ERINVKEEPLSEEDLRALQKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKQQDQYYDV
VRDVRQNKGSILKASVDYIRKLKVDQQKRKLLEEKVRIQDIQNKRLVLKLQEYEGQMKAY
GIPVQSLNEALFTVNEKAFPRNVTSVSSSSPSSSSTASQSVQTQALLLSSTSSSFIKEEP
SPTHDLDSCQLSASSLQDFMDDDCEGPVSNGDPMLSSPHLSPQGVIASPASSSHYSTGNG
DDSGALSPDSMELTSA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcgatcaccactttggacttggaggacattcgcaataacttgcccacgcca
tcctttgacaggaatcacggctgctacttcaacctatcaaagcctcaactcgaccatcac
tcccacccatatgactcgcaacacctcggatcatcattctacgggccaaggcaattggaa
gagggctcgaattttatggattccaatgtactctttgccatggattctgccaccgaaggt
tatgaccactcatccaatcctttgagtgtgggtcagacctcccaagagtccagccgcaag
agtgacagttacaatttggatctcgatcctgagctagagcgcattttggaaaccgaccct
tcgtgtctgaaagatatcaagagcaaaagttttcagtttggttcaaatgtcaacagaaaa
gcgtccgagttcgaggacacggactcattcgccgcccaagacctactattcaccccgcat
tggtccagcctttcccaagagacccctgagcccccgtctgatgggtttccaaccgttcca
accgccaagccgtaccgttcaatatccaaccaccatggggataagattgtgaaacatcct
aatgtggttgaaagcgtgcgggttcgagctttattggaccaaaggccgccatcatttaaa
gagctgaccttgacttcacgaacacaagctcgtcaaatgcttgatcgcgaactatgtctg
caacagccaggtcgagagctcagcagccaatcatgtcaagagaagacttctgacagcaga
ccgcggggacaagcttctcacagacagaatcaagacggggaagagaatggcttgtcaagg
gccattccaggttcccactcaattggtcctcatggctccaagagcgatcatgggactgat
gaagtggttggtcaggtaccacccaatgtgttcaaggtccagaccaggcttcaaaacccg
accaaatatcatatgcaggagtcccaaaaacgccaggtacgtgagtacttggcgtattca
cccaaagcgaatgccaaccttttacgaccgcccaatgtcaaccatcacgccttttccgcc
cccgatcagtcagttgattgcatggagacttgtctaagtcggcctttatatggaccctcg
agcgccccagcaagaccctgtgatggatcagattcttccatcaataaccaacttggccag
gagccatcgtcgtctcaatactccgactccacacaacccgagcccgccacgggcgatcaa
ttcctggatgagttcctcagcaacgatgcctccttagacgacggggctgtgccggatatc
aaagtcattgattccagcataaacatgacggccaatgaggtgaataccaacaccttgctg
gactttttcagtcagttgaacaaatccccacacaaaacaaatttgaatggaaccgttctg
gaacggatcaatgtgaaagaggaaccactttccgaggaggatctccgtgccttgcaaaag
gaccgacaaaaaaaggacaaccataacatgattgaaagacgaagacgatttaatatcaat
gatcgcatcaaggagctgggaaccctcttacccaagcagcaggaccagtattatgatgtt
gttcgcgatgtccgacaaaacaagggttcaatattgaaggcttcagtggattatattcga
aagttaaaagtggatcaacaaaaaaggaaacttttggaggagaaagtccgaatccaggac
attcagaataaaaggctcgtcctgaaacttcaggaatacgagggtcaaatgaaagcctat
ggcatcccggtacaaagtctcaatgaggcgttattcactgtcaacgaaaaggccttcccg
agaaatgtcacgagcgtgtcgtcatcgtcgccttcctcttcttccacggcctcacagtcg
gttcaaactcaggctttactcctatcctccacatcatcttccttcatcaaagaggagcct
tcacctactcacgatctggattcctgtcaactctcagccagctccttacaagacttcatg
gacgacgattgcgagggacctgtgtcgaatggcgaccccatgctttcatcccctcacctc
tcaccccaaggggtgatcgcttcgcccgcatcctcatcccattattcgacgggcaatgga
gacgacagtggggcgctatctccagattccatggagttaacttcggcctga
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