Thermomonas carbonis: H9L16_15220
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Entry
H9L16_15220 CDS
T06786
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tcn
Thermomonas carbonis
Brite
KEGG Orthology (KO) [BR:
tcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcn03009
]
H9L16_15220 (rimO)
Enzymes [BR:
tcn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9L16_15220 (rimO)
Ribosome biogenesis [BR:
tcn03009
]
Prokaryotic type
ribosomal protein modification factors
H9L16_15220 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNN69966
UniProt:
A0A7G9SQ41
LinkDB
All DBs
Position
complement(3290273..3291604)
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AA seq
443 aa
AA seq
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MSLQQPKVGFVSLGCPKALVDSERILTQLRVEGYDLVQAYDDADVVVVNTCGFIDSAVAE
SLDAIGEAMAENGKVIVTGCLGKRAEIIREAHPGVLSISGPQDYASVMDAVHTALPPRHD
PFVNLLPDYGLKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDDVLREAEKLVR
GGVRELLVVSQDTSAYGVDVKYAERSWRDKTYQTRMKALCEGLSELDAWTRLHYVYPYPH
VDDIIPLMADGKILPYLDIPFQHASTRVLKLMKRPGAVDKTLERIQRWRAICPELTIRST
FIVGFPGETEAEFEELLDFLDEAQLDRVGAFAYSPVDGAKANDLPDPVDEDVKQERLARF
MERQAAISEARLAAKVGTVQRVLVDAIDGELAIARSMADAPEIDGLVQVQDGREAGLVPG
EFTRVRIMGSDEHDLYGEVEYDD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccctccagcaaccaaaagtcggcttcgtgagcctcggctgtcccaaggccttggtg
gactcggaacgcatcctcacccagctgcgggtcgagggctacgacctggtgcaggcctat
gacgatgccgatgtggtggtggtcaacacctgcggcttcatcgacagcgcggtggccgag
tcgctggatgcgatcggcgaggcgatggcggagaacggcaaggtcatcgtcaccggctgc
ctgggcaagcgcgcggagatcatccgcgaggcacatcccggcgtgctgtcgatcagcggc
ccgcaggactacgccagcgtgatggatgcggtgcatacggcgctgccgccgcgccacgat
cccttcgtcaacctgttgccggactacggcctgaagctcacgccgaagcactacgcgtac
ctgaagatttccgaaggctgcaaccaccgttgcagcttctgcatcatcccgtcgatgcgc
ggcgaccttgtgtcgcgcccggtcgatgacgtgctccgcgaggccgaaaaactcgtgcgc
ggcggcgtgcgcgaactgctggtggtgtcgcaggacacgtcggcttatggcgtcgacgtg
aaatacgccgagcgcagctggcgggacaagacctaccagacccggatgaaggcgctatgc
gaaggcctctcggaactcgacgcgtggacgcgcctgcactacgtgtatccgtacccgcac
gtcgacgacatcatcccgttgatggcggatggcaagattcttccgtacctcgatatcccg
ttccagcacgccagcacgcgtgtattgaaactgatgaagcggcccggcgcggtcgacaag
accctggagcgtatccagcgctggcgcgcgatctgcccggagctgacgatccgcagcacc
ttcatcgtcggcttccccggcgagaccgaggcggagttcgaggaactgctggatttcctc
gacgaggcgcagctcgaccgcgtcggtgcgttcgcttattcgccggtcgatggcgcgaag
gcgaacgacttgccggacccggtcgatgaagacgtcaagcaggaacggttggcgcgcttc
atggagcgccaggccgcgatcagcgaagcacgccttgcggccaaggtcgggacggtgcag
cgagtgcttgtggatgcgatcgatggcgaactcgccatcgcgcgttcgatggccgatgcg
ccggaaatcgatggcctggtgcaggtgcaggacggccgcgaggctggcctggtgcccggc
gagttcacccgcgtgcggatcatgggcagcgacgagcacgacctctacggcgaagtcgaa
tacgacgactga
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