Pseudoduganella chitinolytica: PX653_15470
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Entry
PX653_15470 CDS
T08857
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct00240
Pyrimidine metabolism
tct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PX653_15470
Enzymes [BR:
tct01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
PX653_15470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
WEF30871
LinkDB
All DBs
Position
3514489..3515409
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AA seq
306 aa
AA seq
DB search
MQPFLSFSPEVAAARAAGKPVVALESTIISHGMPYPQNVQTAREVEQIIRDGGAVPATIA
VIGGKICVGLTDEQLELLGQSPEAMKVSRRDLAYVLSQNKLGATTVAATMICAQLAGIPV
FVTGGIGGVHRGAETSFDISADLQELAQTNVAVVCAGVKSILDIGLTLEYLETKGVPVVS
VGQPGFPAFFTRESGFNADFQLDTPAEQAAFIQTKWRLGLQGGVVVSNPVPAADAMPKEE
IDAITVQALQEAAQNGVTGKKVTPFLLARIKTLTQGRSLATNIALVKNNARVGAALARAM
VEYPTA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgttcctctccttttcgcccgaagtggccgcggcgcgcgctgccggcaaaccc
gtcgtcgccctcgaatcgacgatcatctcgcacggcatgccctacccgcagaacgtgcag
accgcacgcgaagtcgagcagatcatccgtgacggcggcgccgtccccgcgaccatcgcc
gtcatcggcggcaagatctgcgtgggcctgacggacgagcagctggagctcctcggccag
tcgcccgaagcaatgaaggtcagccggcgcgacctggcctacgtgctgtcgcagaacaag
ctgggcgccaccacggttgccgcgacgatgatctgcgcccagctggccggcatccccgtg
ttcgtcaccggcggcatcggcggcgtacaccgcggcgccgagacgagcttcgacatctcg
gccgacctgcaggagctggcgcagaccaatgtcgccgtcgtctgcgcgggcgtcaagtcg
atcctcgacatcggcctgacgctggaatacctcgagacgaaaggcgtgccggtcgtcagc
gtgggccagcccggcttccccgccttcttcacgcgcgaaagcggcttcaatgccgacttc
cagctcgacacgccggccgagcaggccgcgttcatccagaccaagtggcgcctgggcctg
cagggcggcgtcgtggtcagcaatccggtgccggcagcggatgccatgccgaaggaggag
atcgacgcaatcaccgtgcaggccttgcaggaagcggcgcagaacggcgtgacgggcaag
aaggtcacgccgttcctgctggcgcgcatcaagacgctgacgcagggccgcagcctggcc
accaatatcgcgctggtgaagaacaatgcccgcgtgggcgccgcgctggcacgcgcgatg
gtggagtatccgaccgcgtaa
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