KEGG   Triticum dicoccoides (wild emmer wheat): 119280278
Entry
119280278         CDS       T07278                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1-like
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119280278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119280278
Enzymes [BR:tdc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     119280278
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     119280278
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 119280278
NCBI-ProteinID: XP_037417078
LinkDB
Position
3B:complement(844371811..844380188)
AA seq 1506 aa
MVATIVQVRAQPMEEEFPVTHPSQLAGNPTLGLPLQLGHCDSCGATDLAKCQGHFGFIKL
PVSVYHPSHISELTKILNMICFSCLQFKNSKKQKNVEKESNFTSCSYCQDLPPIHVAKVK
KSNGALTLELRVPSRKELEEGFWSFLDQFGFHTKGSSHYRRLFAEEVQKIMEKISEKTRS
QIAAKGYILQDGFVMSNLPVPPNCLRAYNVLDETLMCSPDASTNLLRKIVLNVHGINSSR
VGPPTFQEHEVEADDLQVAIADYIKHAGTARGPQDITFKSLPATKQWQQKMKSLCISKSS
SFSCRGVITGDPYIPMNVVGVPDEVARRMSVQERVTDYNIAQLQGMMGRDLCLTHEDANS
ITHSLDVGKANKKRTILKVGEPVNRRILDGDAVFVNRPPSTDKHSVQAMYVRVHTDHTIK
INPLICGPLGADFDGDCAHIFFPRSLSARTEAIELFTVEKQLVSSHNAKLNFQLKNDCLL
ALKKMSARKYYRREANELLNAMFTAGLIPKKRLSGGPEWSFAQILETVLPQENKLLIRDL
VAGTITISSVLSTKNPREAIEFLNLLQPLLMESLFTDGFSISLRDFNVQNPIPQTIQNQT
LDLDKLPKPIVDFITSSDIRFLVDQKRDSAMTKVVEQIGFLGHQLQRNGRLYSGSLVEDC
LSKSLSKCGSGTNGCHPLEAHGFVRNSLCNGLNPYEDLLHSISAREKTIRASKGLVEPGV
LFKNMMAMLRDVVACYDGTIRNLCGNSVVKFDSTNSSSSVTPGDPVGILAATAVTNAAYK
AVLDPNQNNMASWDSMKEVLLTRASSRNENDQKIILYLSKCSCGDNFCMERASLAVQACL
KRTEVEDCATEISIHYQQQNIQPTHGLVGHIHLDKKQLDEMNISMEGILQKCQKEIYRCR
KNKGQVNQLMKRVVISSECMCYQDADDEEQVSCLQFFLTESVTTRMDESSARVVQLMANT
ISPILLDTIIKGDPRVQEVNIIWVEPQDTCWVQNSGIEQKGELALVITMDKNSTGESGDV
WGTAMDACTPVMDLIDTTRSVPYSIQRVQEGFGISSAFGRVTQHLSKAVGMVTKSVLEEH
LTTVASSMTCTGNLHGFNSYGYKATFKSLKIQAPFMKATLAVSPPFNFVFNSPLVQQTFH
LPMFSHVCSMQLFSPFSSEPLCLLQSAGNENLGGYGLYEYLTEVETTRAAEDNMIVPYGS
CLYDVDNLEEDGIEEDEVLCLGGNSPITWTDRPKANLLLHDLQGWRAEQGHQKVPVANGQ
HGKHVATESSGTSGWNQRSSTTKVYQRRQRNSNWSSDATQQDGNPSWNKAYVAGPSNFAI
TGPSSGASGWNQSSSTTKVYKRRQFDSNWSSDATQQDGNPSWKKANVAGQGNFAITGPSS
SGGWSRKTNNLARGRGGGRGAIWKSEGSHRGGNSRWKAQRANTTSAPNFQNSGPSNFGGQ
NIKTGNLGPCRGRGPAWRSNGPNRGGGNSGQRGSSNFTLAEQQIHAQVDPIMKEVKRIIR
ESRYNI
NT seq 4521 nt   +upstreamnt  +downstreamnt
atggtcgccaccattgtgcaggtgagggcgcagccgatggaggaggagttcccggtgacg
cacccgagccagctggccgggaaccccacgctgggcctgccgctgcagctcggccactgt
gactcctgcggcgccaccgacctcgccaagtgccaaggtcatttcgggttcatcaaactg
cccgtatccgtctaccacccgagccatatctccgagctgacgaagatactcaacatgatc
tgcttcagctgcctccagttcaagaactccaagaaacagaaaaatgtggaaaaggagagc
aacttcacctcatgttcatattgtcaggatctccctccaatacatgttgcaaaagtcaag
aaatccaatggagcccttaccttggagctgagagtgccatccaggaaagaactggaagag
ggattttggagcttcctcgatcaatttggctttcacacgaagggcagctctcactaccgt
cgtttattcgccgaagaggttcagaaaataatggagaagatctctgaaaaaacaagaagc
cagattgctgctaaaggatatattcttcaggatggatttgtgatgagcaatctccctgtt
ccaccaaactgcctccgcgcttacaatgttttagatgaaacactcatgtgctctccggat
gcctccacaaacttgctgaggaaaatcgtactcaacgtacatggaatcaacagctcaagg
gttggccccccaaccttccaagaacatgaggtggaagcagatgatcttcaggttgccatt
gctgactacatcaagcatgcaggaacagcaaggggtcctcaagatatcacctttaaaagt
ctgcctgcaacaaaacaatggcagcaaaagatgaagtcgctatgtatcagcaagagctca
agcttctcatgccgtggtgtgatcacaggtgacccatacattcctatgaatgtggtagga
gtgcctgatgaagtagcaaggcgaatgtcggtacaagagcgtgtgacagactacaacatt
gctcagctgcaaggcatgatgggtagagatctttgcctgacacatgaagatgctaattct
atcacgcactccttggatgtggggaaagcaaataagaaacggaccatactaaaggttggt
gagccggtcaaccggagaattctggatggagatgcggtatttgtcaacaggccaccaagc
accgacaagcactcggtccaagcaatgtatgtccgtgtacatactgatcacaccatcaag
atcaacccactcatatgtggaccacttggggcagatttcgatggcgactgtgcccacatt
ttcttcccaaggtcactgtcagcaaggactgaagctatagagctcttcacagtggagaag
cagctggtcagctctcacaatgcaaagctgaattttcagctcaagaatgattgcttgcta
gctttaaagaaaatgtctgctagaaagtactatagaagggaggccaatgaacttttaaat
gcaatgttcacggcagggttgattcccaagaagcgattatcaggtggaccagagtggagt
ttcgctcagattctagagacggtactaccacaggaaaacaaattattaatcagagacttg
gttgctggcactattaccatctcatcagttctgtccacgaagaatccaagggaggccata
gaatttctgaatcttctgcagcccctactaatggaatcattatttactgatggtttcagc
ataagcctgagagacttcaacgtccagaatccaataccacagacaattcagaatcagaca
cttgatcttgacaagttaccgaaaccaattgtggacttcattacttcttctgacattcgc
ttcttggttgaccaaaagagagattcagccatgaccaaagtagtggagcagattggtttc
ttgggacatcagctgcagcgcaacggaagattgtattctggcagcttggtagaggattgc
ctatccaagtcgctgagcaagtgtggcagcggcaccaatggttgccatcctttggaggca
catggttttgtcaggaactcactttgcaatggactgaacccatatgaggacctactccat
tcaatatctgcaagggagaagacaatacgcgcatctaaaggacttgtggagccaggcgtt
ctcttcaagaacatgatggcaatgctccgagatgttgtagcatgctatgatggaaccata
agaaacttgtgtggaaattcagttgtcaagtttgactcaacaaactcatcgagttctgtg
acaccaggagatcccgttggtatcttggcagccactgcggttacaaatgctgcatacaag
gcagtgttagacccaaatcagaacaacatggcctcatgggactcaatgaaggaagtacta
ctcacaagagctagctctcgaaatgaaaatgaccaaaaaataattctgtatctgagcaaa
tgctcctgtggggataatttttgcatggagagagcatcactcgcagttcaagcctgctta
aagaggaccgaagtagaagactgtgctactgagatctcaatccattatcaacaacaaaat
attcaaccaacacatggtcttgttggccacattcaccttgacaagaagcaactggatgaa
atgaacataagtatggaaggtattcttcagaaatgccagaaagaaatatatagatgcaga
aagaataaggggcaggtgaatcaacttatgaagagagttgtgatctcaagtgaatgtatg
tgctaccaggatgcagatgacgaggaacaggtctcttgtttgcagtttttcctaactgaa
agtgtcaccacacgaatggatgaatcttctgcgcgagttgtccagttgatggccaatacc
atttctcctatactcttggacacaatcataaaaggagatccacgagttcaggaggtgaac
ataatatgggttgaaccacaagacacgtgttgggtccagaactccggtatagaacagaag
ggcgaactggcgctggtaatcacaatggataaaaactcaactggggagagtggtgatgtc
tggggaacagcaatggatgcttgcacccctgtgatggatctgatcgacactaccaggtct
gtgccctacagcatccaacgagttcaggaagggtttggaatttcctcagccttcggtcga
gtcacacagcacctttccaaggcagttggaatggttacaaaatcagttctcgaagaacac
ctgacaactgttgcaagcagcatgacctgcacaggtaacttgcatggcttcaacagctat
ggttacaaggccacattcaagtccctcaagattcaggcacccttcatgaaggctacactc
gctgtaagtcctccattcaattttgttttcaactccccattggtacaacaaacatttcac
ctgcctatgttctctcatgtgtgcagcatgcaattattttctcccttctcctctgaacct
ctttgtcttttacagtcagcaggcaatgagaaccttggagggtatggtttgtatgaatac
ctcacagaggtagaaacaacaagagccgctgaagataatatgattgttccatacggttcc
tgcttgtatgatgttgacaaccttgaagaagatggaatcgaagaggatgaagtcttatgt
ttgggaggaaacagtccaatcacttggacagacaggccaaaagcaaatctcctgctgcat
gatcttcaaggttggagggctgaacaagggcaccaaaaagtgccagttgcaaatgggcaa
catggtaaacatgtcgccacagagtcaagtggcactagtggatggaaccagagaagttct
accacgaaagtttatcagagaaggcaacgtaatagtaattggagctcagatgcaacacag
caagatggtaacccgagttggaacaaagcatatgtggcaggcccaagcaactttgccatt
acagggccatcaagtggtgctagtggatggaaccagagcagttctaccacgaaagtttat
aagagaaggcaatttgatagtaattggagctcagatgcaacacaacaagatggtaaccca
agttggaagaaagcaaatgtggcaggccagggcaactttgccattacagggccatctagc
tctggcggatggagtagaaagaccaataatcttgctagaggtcgaggtggtggtagaggt
gcaatctggaaatcagagggatcacaccgtggaggtaacagtaggtggaaagcccaaaga
gccaataccacaagcgccccgaacttccaaaattcaggaccatccaactttggtggacag
aacatcaagaccggcaatcttggcccatgccgtggcagaggaccagcatggagatcaaac
ggaccaaaccggggaggtggcaatagtggacaaagagggagttcaaattttacactagcg
gaacagcagatacatgcacaagttgatccaatcatgaaagaagtaaagaggatcatccgt
gaatcaaggtataatatctag

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