Triticum dicoccoides (wild emmer wheat): 119301075
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Entry
119301075 CDS
T07278
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020
RNA polymerase
tdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119301075
09124 Replication and repair
03420 Nucleotide excision repair
119301075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119301075
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119301075
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119301075
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119301075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
119301075
NCBI-ProteinID:
XP_037433867
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All DBs
Position
5A:287983619..287992756
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AA seq
331 aa
AA seq
DB search
MERSAAGASYQRFPRVRIRELKDEYAKFELKDTDASMANALRRVMIAEVPTVAIDLVEIE
SNSSVLNDEFLAHRLGLIPLTSSAAMSMRFSRDCDACDGDGSCEYCSVEFHLAARATDSG
QTLEVTSTKDLRSTDPKVCPVDQQREYQQALGNVDAYEPDAAGDHRGILIVKLRRGQELR
LRAIARKGIGKDHAKWSPAATVTFMYEPDIRINQELMETLTLEEKQSWVESSPTKVFDID
PVTQQVTIVDPEAYTYDDEVIKKAEAMGKPGLVEINAKEDSFVFTVETTGAITAYELIMN
AITVLRQKLDAVRLQDDDGDLGELGAHLIGG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctcggcggcgggcgcctcgtaccagcgcttcccacgcgtgcggatccgcgag
ctcaaggacgagtacgccaagttcgagctcaaggacaccgacgcgagcatggccaacgcc
ctccgccgcgtcatgatcgccgaggtccccaccgtcgccatcgacctcgtcgagatcgag
agcaactcctccgtcctcaacgacgagttcctcgcgcaccgcctcggcctcatcccgctc
acctcctccgccgccatgtccatgcgcttctcccgcgactgcgacgcctgcgacggggac
ggctcctgcgagtactgctccgtcgagttccacctcgccgcccgcgccaccgactccggc
cagacgctcgaggtcacctccaccaaggacctccgctccaccgaccccaaggtctgccct
gtcgaccagcaaagggagtaccagcaggccctcggcaacgtcgacgcctacgagcccgat
gctgccggtgaccacaggggcatattaattgtaaagctgcgccgtgggcaagagctgcgt
cttcgagcaattgccaggaaggggattggaaaggaccatgccaaatggtctccagctgct
actgtgaccttcatgtatgagcctgacatacgtattaaccaagaactcatggagacactt
acacttgaggaaaaacaaagctgggtggagagcagccctacaaaagtatttgacatcgat
cctgtcacccaacaggtgacgattgtggacccagaggcctacacgtatgacgatgaggtg
atcaagaaagcagaggccatggggaagccaggattggtagagatcaacgccaaggaggac
agctttgtgttcactgtggagacaacgggcgccatcacagcctatgagctgattatgaac
gctatcacagtcctgaggcagaagctggacgctgtccgcctgcaagacgatgacggcgat
cttggtgagctcggcgcccaccttatcggaggctaa
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