KEGG   Triticum dicoccoides (wild emmer wheat): 119302436
Entry
119302436         CDS       T07278                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 5B-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020  RNA polymerase
tdc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119302436
  09124 Replication and repair
   03420 Nucleotide excision repair
    119302436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119302436
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119302436
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     119302436
  RNA polymerase III system
   RNA polymerase III
     119302436
  RNA polymerase I system
   RNA polymerase I
     119302436
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119302436
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N HORMA
Other DBs
NCBI-GeneID: 119302436
NCBI-ProteinID: XP_037435374
LinkDB
Position
5A:complement(509253572..509270556)
AA seq 226 aa
MEPSFDDVPEVVGWMSSMIDRGGRASQESHRLFLARRTALEMLRDRGYSVPESELARTLP
EFRAWWAPEPEVERLTFSTFLASDHSDKVKILFCGPEPVKIATIQEIYDQIEGENLSRLI
LILQGKIMPRAKESVKEKFTFKVDIFQVNELLVNISKHALKPKHEVLTAEEKARLLKKYN
VQDSQLPRMLETDPVARYYGLGKGTVLKVTYDSELTGNHVTYRCIF
NT seq 681 nt   +upstreamnt  +downstreamnt
atggaaccctcgttcgatgacgtccccgaggtcgtcggctggatgtcgtcgatgatcgac
cgcggcggccgcgcgagccaggagagccaccggctgttcctggcgcggcgcacggcgctc
gagatgctgcgggaccgcgggtacagcgtgccggagtccgagctcgcccgcacgctcccg
gagttccgtgcgtggtgggctccggagcccgaggtcgagcgcctcaccttttccaccttc
ctcgcctccgaccattccgacaaggtgaaaattctattctgtggaccagaacctgtcaaa
atcgcaactatccaggagatatatgaccagatcgaaggagagaacttgtccagacttatt
ttgatattgcagggaaagataatgcctagagctaaagagtctgttaaggagaaattcaca
tttaaagtagatatttttcaggtcaatgagttactggttaacattagtaagcatgccctg
aagcccaagcatgaagtgttgactgcagaagaaaaggccaggctcctgaagaagtacaat
gtgcaggattcacagctccctcgcatgctagagaccgatcctgttgctcgctactatggc
ctcggcaagggaaccgtgcttaaagttacatatgacagtgagcttactgggaaccatgtg
acataccgatgtattttctga

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